Gene detail

Detail information of GWHGAAEX011785/evm.TU.scaffold_4.96

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743889357\|ref\|XP_010910830.1\|	3.60E-22	PREDICTED: uncharacterized protein LOC105036795 [Elaeis guineensis]
trEMBL	tr\|R0H9U0\|R0H9U0_9BRAS	2.00E-18	Uncharacterized protein {ECO:0000313\|EMBL:EOA20368.1}
TAIR	AT3G03130	2.00E-16	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	1998693	2002543	-

Transcript Sequence
>GWHTAAEX011785 GATTTGCCATCCACGTGTTGGCATCTCGCCGCTTTCGTCCTCAAGCAGCCAACGGTCATTTTTTGAATTCAAATCACTAGAAGAGAAAAAAAGGGAAATAATTGCCAACGGTCAGGTTTTCAAACGGAGCCATCTATTTTAAAGCTATTTTTTTTTTATAAAGGCAACCCTTCCTCTGCTCCTCCTCGTTTTTTCTTCCCCACCCCTTTCGCAGCAATCTAAGAGAAACAGCCATCCTTTCGATCGTTCCCATGGATTATTACTCCCTCTCCAGAAGAGACTTGCAATTCCTCTGCAAGAAGAACCGCGTTCCTGCCAATCTGACCAACGTGGCCATGGCCAACACCCTCCATGCTCTTGAGATCGTCGAGGGGATAGAGGAGATCAAAGAAGCACTTGGATTCCAATCCCCGAAGCCGATTACCAAAGAAGAGGCCAAGATCCAGCAGCAGTCAGGCTCTTTGCGTCGGTCTCGCCGGGTGACAACTAAAACAGGAGCTATCAAAGACACTCCTTCTAAGGACACACAGAATCGAAAATTTCTCGCATTCCAATCTCCATCTAGAACCGAAGAGGTTTCAGGGAATTTTCCTAAGACGCCTGCGGCAAACAGACCGGTTCAGGGGATGGAATCTCAGAGCTCAAGGAGAAGAGGTAAGAAGATTGAGGAAGTTGGATCTCATGTTAAAGCTATGAATGCCACAGGCATTGTCACCCGAAGAAGCACTCGGCTGTCTTCTATGAAGGCGTTGGAGGGTATATCCACGGCTCGGATAAAAGAGGACGCAGAAGAACAAGAAAGAGAGGAAGATAAAAAAGATGAGGGGAGTAAAGTCCTTAAGAGGTTGCCCAAGACTCGCCGAAGCGCTCGGTCGGCTTCCGCAAAGGCAGCGGAGTATCAAGAAGATGGGAAGAAAGGTTTTGCTGCAAGTGCTGGTGATTTGTTTGTTGATCTTGTTGATGAAGATGAAGAAGTGCGGGATATAAAAGTAGAGGCCGAAAATGACAAGAGAGATTTTTCTGCAGGTGCTGATGATTCGTTTATTGATCTTGTTGAAGAAGAGGAAAAAGTGCCGGATCATAAAGTAGAAGTCGATAATGGGAAGAAAGATTTTGCTGCAAGTACCGGTGATTCGTTTGTTGATCTTGTTGAAGAAGAAGTGAATGATGAGCAAAACGATTCTTCTGCACAGGAAATCAAGCTCTCAAACCTTGATTCCTCAACTGAGCCTGAAAATGGCGATTTAAGTGTTGCTCAGGCCCAGGAAGACGAAAAGAAAGATCAAGAATTGGAAATTCATATCTTGAATTCCTTAAATAGAGAGAACCTTGATGAAAATTCCATTGTTGAAGAAAAAGATGAAACTTTGGAATATTGCTGCGACCAATCAATAGAAAATAATGATCCTGAGAAAGATACCAGAGAAGATGAATCCGCCGGCCTATCGCTGGATAATGAAGCTGCTGACAGTTCCAGCAATCAGTCTCTGAAAGACCAAGAATTGGACATTCATGCCTTGAATTCCTTAATTGAAGAAGAGAACCTTGATGATGAACATTCTGTTGTTGAAGAAAAAGATGAGACTACGGAACATTGCTGCGAAAAAACCAATCTTGTGAAAGATTCCAGAGAATCAGTCTGGCCGGGTAATGAAGCAGCTGATAGTTCCAACAATCAGTCTCCAAGAAAGTATTCCGTTGATAATTGTTCCTGCGAACAACTGACAACAAGATTGCTGCAAGAAGGAATTATAGAAGAAGAGAACCTTGATGATGTAGATTCCGTTGTTGAAGAAAAAGATAAGACTTTGAAATGCTGCTGTGACCAATCAATAGAAAAAAATGATATTGTGAAAGAATCCAGAGAAGAAGAATCCGGCCGCCTATCGCTTGGTAATGTAACTGCTGATAGTTCCAACAATCAGTCTCCAAGAAATGATTCCGTTGATAATTGTTCCTGCGAACAACTGACAACAAGATTGCTGCAAGAAGGAATTATTGATTGTTCGATGGAAAGCGATGGTGTTCCCAGAAAACATTTTCGTGCAGTTAACATTGTGGACAATTCCGGCAGCTTATCGCTAGAAAATGAAGCCTCTGATAAACTTAATAACCAGTTACCAGTAAACGATTTTGTTGATTATTTGGCTAATTCTGTAGCTAAGGACATGTTAAATGGCGAACTACTATCTCCATTGCAGCCGGAGGAAACCATCGATTGTCCTCTTCGAAGCAATCTAGTTTTTGGTAAATCGCCCGAAAATGTAGCAGCTGAAGAGATAGCCCTATTGCAGTATGAAGAAACCATGGATTGCATCAGGGAATCAAGTCGCGGAATACAGGAAGAGGAAGAGGACAAACTCAGCTATCTCTTCAAACAATCGATCCTAAATGAAACACATGAAATCAGCCATTTTCAGGCTGAGAAACCAGTTCAAGGTCCCACTTTTAATAATATCCCCATTGAGTTTCCAGATTCAACTGCAGATTCTGCCTTTGAATTAAGCTTCCCGAACTCTGGCGAACTTGCTGCTCAGAAACCCAATGAAGCAGAAGCAGCACAAAATGCCTCTTATGAGTCACAGGTTAAACTTCCTGTGATGTTTTCTTCCCCTCTTAAGCTCCCATCAAGTGAAGAAATTGGCAACATGGCTGAAGAAGAGGGCAAGGAAAACATCCTCAAAGGAATGAACTTGGAGCTTATGAGCTTGACAAAGCTCAGAGCAATGTACAAGAATATGATGGAGAGGGAGAAAGCTGCTGCCAAAGAAGAAGAAGATCCGAAAGGCTTGAACTGCCCCGAAAATGATGAAAACTGTAATCAGATATTGAATGAGGATATGATTGTTAACTCTGAGAAGAAGAGATCTGTTCAGTTGATGCAAGAGGATTTGAAGGGTCTTAGTAGAAGCAAGAATGATTCAAACGGTAAAGTTAAGCCGGAGTGGAAGAGAACTCCCTTGAAGAATCTCAACTGAAAAAATGGGGGTATTTGAGTAATGATGAATCAGCTATTATTAGTAATTGGATTGGAAACTTGGGTTTCTCTCCAACAAAATCTGGATCATGCTATGATGATTGTAATTTGGGACCCTAAATGATCAAAAATTTTGTTTTTTTTTTCTTGTTTTT

Network for GWHGAAEX011785

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.090
SRP064423	SRR2545915	Juvenile tuber	3.480
SRP108465	SRR5643513	five period of Gastrodia elata	1.680
	SRR5643514	five period of Gastrodia elata	3.930
	SRR5643515	five period of Gastrodia elata	1.500
	SRR5643524	five period of Gastrodia elata	2.160
	SRR5643525	five period of Gastrodia elata	0.710
	SRR5643528	five period of Gastrodia elata	0.700
	SRR5643658	five period of Gastrodia elata	0.620
	SRR5643659	five period of Gastrodia elata	2.110
	SRR5643660	five period of Gastrodia elata	1.140
	SRR5643661	five period of Gastrodia elata	1.640
	SRR5643662	five period of Gastrodia elata	1.790
	SRR5643663	five period of Gastrodia elata	2.330
	SRR5643664	five period of Gastrodia elata	1.650
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.790
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.180
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.810
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.060
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.080
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.830
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.920
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.920
SRP279888	Gastro	Gastrodia elata tuber	0.36
	Juven	Juvenile tuber	2.82
	Mother_Gastro	Mother tuber of Gastrodia elata	1.73
	Mother_Juven	Mother tuber of Juvenile	5.27