Detail information of GWHGAAEX011786/evm.TU.scaffold_4.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290521|ref|YP_001737337.1|2.00E-31small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG00704.00E-103GTP-binding ADP-ribosylation factor Arf1
nrgi|743826760|ref|XP_010933390.1|2.42E-114PREDICTED: ADP-ribosylation factor 1-like isoform X2 [Elaeis guineensis]
Swissprottr|Q06396|ARF1_ORYSJ2.00E-69ADP-ribosylation factor 1
trEMBLtr|M0SVE9|M0SVE9_MUSAM7.00E-109Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P03700_001}
TAIRAT3G031204.00E-103ADP-ribosylation factor B1C

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001120052312043918-
Transcript Sequence

Network for GWHGAAEX011786

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf61092.00E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.130
SRR2545915Juvenile tuber64.730
SRP108465SRR5643513five period of Gastrodia elata65.410
SRR5643514five period of Gastrodia elata72.480
SRR5643515five period of Gastrodia elata64.350
SRR5643524five period of Gastrodia elata74.310
SRR5643525five period of Gastrodia elata79.300
SRR5643528five period of Gastrodia elata85.750
SRR5643658five period of Gastrodia elata98.170
SRR5643659five period of Gastrodia elata59.130
SRR5643660five period of Gastrodia elata60.790
SRR5643661five period of Gastrodia elata64.240
SRR5643662five period of Gastrodia elata62.950
SRR5643663five period of Gastrodia elata64.990
SRR5643664five period of Gastrodia elata61.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.820
SRR6049655Rhizomagastrodiae_C368-T10_good_146.020
SRR6049656Rhizomagastrodiae_C368-T07_good_144.970
SRR6049657Rhizomagastrodiae_C368-T07_good_142.480
SRR6049658Rhizomagastrodiae_C368-T04_good_143.070
SRR6049659Rhizomagastrodiae_C368-T04_good_149.500
SRR6049660Rhizomagastrodiae_C368-T01_good_146.520
SRR6049661Rhizomagastrodiae_C368-T04_good_138.760
SRR6049662Rhizomagastrodiae_C368-T01_good_141.130
SRR6049663Rhizomagastrodiae_C368-T01_good_140.150
SRR6049664Rhizomagastrodiae_C368-T10_good_153.720
SRR6049665Rhizomagastrodiae_C368-T10_good_153.720
SRP279888GastroGastrodia elata tuber 78.71
JuvenJuvenile tuber90.76
Mother_GastroMother tuber of Gastrodia elata 72.26
Mother_JuvenMother tuber of Juvenile 98.25