Gene detail

Detail information of GWHGAAEX011790/evm.TU.scaffold_4.101

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672109145\|ref\|XP_008788702.1\|	1.38E-120	PREDICTED: probable WRKY transcription factor 14 [Phoenix dactylifera]
Swissprot	tr\|Q9SA80\|WRK14_ARATH	3.00E-63	Probable WRKY transcription factor 14
trEMBL	tr\|K3YBZ1\|K3YBZ1_SETIT	4.00E-92	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si011735m}
TAIR	AT1G30650	1.00E-62	WRKY DNA-binding protein 14

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	2088349	2109259	-

Transcript Sequence
>GWHTAAEX011790 TTCGTTATTTTCTTCTCTTTCCTTATTTGTTGCGTGTTTAATTGTCCATGGAATGAAGAAGTCAGCACCCAACACTAAAAAATAGAAAACCCCTCTCTCTCTCTTCTGTCCTCTGAAAATTAACTACACATGTTTGATTCTTTTTCTGCTCCCCATGATTGGAGGCTGAAAGCCATATATAGTGAAGAAGAAAGAAGGAGAAGATTGAAGAGTTAAATAGCTTTGATATATATTCTTTCTCTCCTCAGGTGCACATCTACATAATCATATATATATATGAACGGGAGAAGAGCAAGAAGAAGAAGATAGTTATGTCTCATGACTGTTTACTCTCTTCTTTTGATTAAAAGCACTTTCCTCGGTCTCACACTTAGACTGCAGCACTGATCAAGATCATGTGTGACTACTTCTGGCAAAGGATGGATCAGAACAATCAGGGCGACCTCACAGACATCTTCCGGAACGGTGGCCTCCCTACCAACGACAGCTGGCACCTTCTCCCCGAGCCCGACGCCTCCTTCATGCCGCCTTCCGATATCTTCGGGGTCCCCTTCGCCGAAATTGGAGACCCCTTGCTAGACGAACTATCCCCCGCCGGCTTCCTGAACTCCCCGGAGAAGGCGCGGCTTGGGGAGGATGCGAAGGGCGGAATCTTCTCGAGGATGATTCAAATTTCGCCGGCGACAATGAAGCTGACTTCCGAGACCTTGCCGCCGCCCCCGCTCGCCGCAACCAGCACAGCTTGCGACAGCGGCGGCAGCTTGCAGATCTCATCAGCGAGAGCTCAAGGGATGATCAAGAGAAGGAAAAGTCAGGTGAAGAAAGTGGTGTGCATACCAGCACCAGCTGCAGCAAGTGGTAGGCCAAATGGAACTGGCGAAGTTGTTCCTTCTGATCTATGGGCTTGGAGAAAATATGGTCAGAAGCCAATCAAAGGCTCTCCTTACCCCAGGGGCTATTATAGATGCAGTAGTTCAAAAGGATGCTCAGCTAGAAAACAAGTTGAAAGAAGCAGGACTGACCCCAACATGCTTATCATAACTTACACTTCAGAACACAATCATCCATGGCCAACTCAAAGAAATGCCCTTGCTGGATCTACTAGATCTCAATCTTCAAAGCCCAATAATAATAACTCAAGTTCCATGAAGAATAACCCCCTTCACAATTCAAATCAATCAATAATTATAAGAAGAAAGGAAGAACAGTACAAAGATCAATGTTCAAGCTCAACTGTGCAATTACCAAAAGTGGAGGAAGAAGCATATGAGATGGACAAAGAGCAAATATCTTTTGTTGAACATCAAGACCATGATTTTGATCAAGTTTTTGATGAGAATTTCATGATGTCGACAGATTCGAACCATCATGACGGCTTCTTTGCGGATTTTGCCGAGCTTGAATCATCTTCGTCTGATCCAATGGATCTCATCTTCCCCAAGGGGTTCATGGGAGATCACAAGTTAAATGAGATGAGGGAGAGAAACAAGTCCATGGATGACCCCTTCAACATGTTTGATTGGGAAGAAGAAGTTTATAACAAGGACTTGGAGTAACGTAATCGAAATCAACCCCGGGATACCTCCTTTTCAATTGCTTTACTTTTTGTTAAGTTTTGAAGAGTTTTTGTTTTTAATGACTTTTCTTTTTTACTAGTTCTAATTGTTTCTCTTGTTTCTTAAAGAAAAATTTGTATGTTATGGAAGAAAAAAAGAGGAAGATCATATACATTTGAGGTAAGATAATTGGAAGATGGGACAGAAAGCTGAGGAACAGAAGCATTGAATGGTTGAGGAAAGTACATCTATGAGATGTCACAAAAAAAGCATTAGAAGGCATGCAATATTGTGCAATATCAATATCTACTTTTCTTATTATCCTTTCATCATTTTTGTCTCCACTCTATGCTCTTTGAAAGTGGGAGTCAATTCAAGTGATCTATACAATGATGAAGTTGAATAAGTGTGTCCTCACTTGCCTTGCTTTAGCAAAAAAACGTGTGTTGGTTATAGTTCTAAATTATAGTGCATTCTTAATGGGAAATGGTCTAATAATTGAAATGTAGAAGCGAGATGAGAAGCTTTCTTGTTCCTCAACTTTCTATTTACCATTCTTCAATGATCTATTTAATAATAAAAGTTCTTTTATAGTGTATCAATAGTTATTTTCTTATTTGGCATCAAAACTTGCAAATCATTTTATGTTGAACCAGACTATATCTATTGCTGTTTTGCTTCCTTTATTTGTGTAAATAAGAAGTAAAAGATATTAACCCCATAGACTGTGTATATATGAAAAAG

Network for GWHGAAEX011790

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03106.14	WRKY	167	224	4.30E-26

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.690
SRP064423	SRR2545915	Juvenile tuber	12.950
SRP108465	SRR5643513	five period of Gastrodia elata	10.240
	SRR5643514	five period of Gastrodia elata	6.810
	SRR5643515	five period of Gastrodia elata	8.490
	SRR5643524	five period of Gastrodia elata	8.990
	SRR5643525	five period of Gastrodia elata	1.550
	SRR5643528	five period of Gastrodia elata	0.340
	SRR5643658	five period of Gastrodia elata	0.590
	SRR5643659	five period of Gastrodia elata	2.020
	SRR5643660	five period of Gastrodia elata	3.390
	SRR5643661	five period of Gastrodia elata	3.180
	SRR5643662	five period of Gastrodia elata	4.160
	SRR5643663	five period of Gastrodia elata	1.650
	SRR5643664	five period of Gastrodia elata	3.060
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.520
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.080
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.220
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.610
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.370
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.650
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.870
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.180
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.180
SRP279888	Gastro	Gastrodia elata tuber	4.14
	Juven	Juvenile tuber	5.51
	Mother_Gastro	Mother tuber of Gastrodia elata	4.28
	Mother_Juven	Mother tuber of Juvenile	6.46