Detail information of GWHGAAEX011794/evm.TU.scaffold_4.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34561.00E-44NADH:ubiquinone oxidoreductase, NDUFS6/13 kDa subunit
nrgi|743859411|ref|XP_010942737.1|2.11E-52PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Elaeis guineensis]
Swissprottr|Q9M9M6|NDUS6_ARATH4.00E-45NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Precursor)
trEMBLtr|M0SIC7|M0SIC7_MUSAM1.00E-46Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P27610_001}
TAIRAT3G030701.00E-44NADH-ubiquinone oxidoreductase-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001122365382241535-
Transcript Sequence

Network for GWHGAAEX011794

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10276.8zf-CHCC61982.70E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03939NDUFS6 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.730
SRR2545915Juvenile tuber45.640
SRP108465SRR5643513five period of Gastrodia elata92.190
SRR5643514five period of Gastrodia elata174.810
SRR5643515five period of Gastrodia elata117.230
SRR5643524five period of Gastrodia elata164.970
SRR5643525five period of Gastrodia elata120.700
SRR5643528five period of Gastrodia elata168.950
SRR5643658five period of Gastrodia elata104.340
SRR5643659five period of Gastrodia elata86.550
SRR5643660five period of Gastrodia elata69.420
SRR5643661five period of Gastrodia elata78.650
SRR5643662five period of Gastrodia elata82.830
SRR5643663five period of Gastrodia elata82.700
SRR5643664five period of Gastrodia elata73.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_159.130
SRR6049655Rhizomagastrodiae_C368-T10_good_1129.810
SRR6049656Rhizomagastrodiae_C368-T07_good_166.950
SRR6049657Rhizomagastrodiae_C368-T07_good_150.960
SRR6049658Rhizomagastrodiae_C368-T04_good_141.550
SRR6049659Rhizomagastrodiae_C368-T04_good_139.030
SRR6049660Rhizomagastrodiae_C368-T01_good_142.570
SRR6049661Rhizomagastrodiae_C368-T04_good_142.880
SRR6049662Rhizomagastrodiae_C368-T01_good_195.830
SRR6049663Rhizomagastrodiae_C368-T01_good_171.000
SRR6049664Rhizomagastrodiae_C368-T10_good_1117.340
SRR6049665Rhizomagastrodiae_C368-T10_good_1117.340
SRP279888GastroGastrodia elata tuber 93.02
JuvenJuvenile tuber131.32
Mother_GastroMother tuber of Gastrodia elata 175.46
Mother_JuvenMother tuber of Juvenile 157.57