Detail information of GWHGAAEX011802/evm.TU.scaffold_4.116
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|197106293|ref|YP_002131670.1| | 2.00E-29 | asparaginase [Phenylobacterium zucineum HLK1] |
| KOG | KOG1592 | 4.00E-144 | Asparaginase |
| nr | gi|743852658|ref|XP_010940442.1| | 0 | PREDICTED: putative threonine aspartase isoform X1 [Elaeis guineensis] |
| Swissprot | tr|O65268|TASP1_ARATH | 8.00E-160 | Putative threonine aspartase subunit beta (Precursor) |
| trEMBL | tr|D7UC44|D7UC44_VITVI | 3.00E-179 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI40309.3} |
| TAIR | AT4G00590 | 4.00E-144 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 2422562 | 2476733 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011802
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01112.17 | Asparaginase_2 | 13 | 333 | 3.80E-46 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0004298 | Molecular Function | threonine-type endopeptidase activity |
| GO:0016787 | Molecular Function | hydrolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.140 |
| SRR2545915 | Juvenile tuber | 13.660 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.470 |
| SRR5643514 | five period of Gastrodia elata | 4.290 | |
| SRR5643515 | five period of Gastrodia elata | 3.660 | |
| SRR5643524 | five period of Gastrodia elata | 3.170 | |
| SRR5643525 | five period of Gastrodia elata | 6.200 | |
| SRR5643528 | five period of Gastrodia elata | 5.640 | |
| SRR5643658 | five period of Gastrodia elata | 4.560 | |
| SRR5643659 | five period of Gastrodia elata | 8.970 | |
| SRR5643660 | five period of Gastrodia elata | 12.440 | |
| SRR5643661 | five period of Gastrodia elata | 11.730 | |
| SRR5643662 | five period of Gastrodia elata | 13.990 | |
| SRR5643663 | five period of Gastrodia elata | 14.740 | |
| SRR5643664 | five period of Gastrodia elata | 13.390 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.580 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.120 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.860 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.270 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.070 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.580 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.380 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 2.680 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.080 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.150 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.150 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 11.38 |
| Juven | Juvenile tuber | 7.49 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 6.61 | |
| Mother_Juven | Mother tuber of Juvenile | 6.83 |