Detail information of GWHGAAEX011804/evm.TU.scaffold_4.118


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186685094|ref|YP_001868290.1|2.00E-60bifunctional folylpolyglutamate synthase/ dihydrofolate synthase [Nostoc punctiforme PCC 73102]
KOGKOG25252.00E-153Folylpolyglutamate synthase
nrgi|672121043|ref|XP_008783812.1|0PREDICTED: folylpolyglutamate synthase, mitochondrial isoform X2 [Phoenix dactylifera]
Swissprottr|F4K2A1|FPGS1_ARATH5.00E-30Folylpolyglutamate synthase {ECO:0000250|UniProtKB:Q05932, ECO:0000312|EMBL:CAC80839.2}
trEMBLtr|A0A061G8S9|A0A061G8S9_THECC0Folylpolyglutamate synthetase family protein isoform 2 {ECO:0000313|EMBL:EOY23454.1}
TAIRAT5G414802.00E-153Folylpolyglutamate synthetase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001124847352518090+
Transcript Sequence

Network for GWHGAAEX011804

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08245.11Mur_ligase_M963391.00E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20457DHFS Metabolic pathways map01100
Folate biosynthesismap00790

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0009396Biological Processfolic acid-containing compound biosynthetic process
GO:0004326Molecular Functiontetrahydrofolylpolyglutamate synthase activity
GO:0005524Molecular FunctionATP binding
GO:0016874Molecular Functionligase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.410
SRR2545915Juvenile tuber5.780
SRP108465SRR5643513five period of Gastrodia elata7.690
SRR5643514five period of Gastrodia elata9.290
SRR5643515five period of Gastrodia elata7.550
SRR5643524five period of Gastrodia elata8.550
SRR5643525five period of Gastrodia elata10.650
SRR5643528five period of Gastrodia elata10.710
SRR5643658five period of Gastrodia elata12.260
SRR5643659five period of Gastrodia elata6.990
SRR5643660five period of Gastrodia elata6.560
SRR5643661five period of Gastrodia elata6.500
SRR5643662five period of Gastrodia elata7.520
SRR5643663five period of Gastrodia elata8.040
SRR5643664five period of Gastrodia elata7.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.500
SRR6049655Rhizomagastrodiae_C368-T10_good_17.930
SRR6049656Rhizomagastrodiae_C368-T07_good_15.600
SRR6049657Rhizomagastrodiae_C368-T07_good_16.330
SRR6049658Rhizomagastrodiae_C368-T04_good_14.020
SRR6049659Rhizomagastrodiae_C368-T04_good_12.790
SRR6049660Rhizomagastrodiae_C368-T01_good_14.290
SRR6049661Rhizomagastrodiae_C368-T04_good_15.240
SRR6049662Rhizomagastrodiae_C368-T01_good_14.980
SRR6049663Rhizomagastrodiae_C368-T01_good_14.190
SRR6049664Rhizomagastrodiae_C368-T10_good_17.320
SRR6049665Rhizomagastrodiae_C368-T10_good_17.320
SRP279888GastroGastrodia elata tuber 6.52
JuvenJuvenile tuber10.58
Mother_GastroMother tuber of Gastrodia elata 11.30
Mother_JuvenMother tuber of Juvenile 11.25