Detail information of GWHGAAEX011811/evm.TU.scaffold_4.125
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|291612754|ref|YP_003522911.1| | 1.00E-08 | serine/threonine protein kinase [Sideroxydans lithotrophicus ES-1] |
| nr | gi|743852768|ref|XP_010940470.1| | 0 | PREDICTED: probable serine/threonine-protein kinase At5g41260 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q9FHD7|Y5126_ARATH | 0 | Probable serine/threonine-protein kinase At5g41260 |
| trEMBL | tr|M0S032|M0S032_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P15240_001} |
| TAIR | AT5G59010 | 0 | Protein kinase protein with tetratricopeptide repeat domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 2578242 | 2608793 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011811
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 74 | 310 | 5.70E-27 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-XII-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14500 | BSK | Plant hormone signal transduction | map04075 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005515 | Molecular Function | protein binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 64.440 |
| SRR2545915 | Juvenile tuber | 75.310 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 51.130 |
| SRR5643514 | five period of Gastrodia elata | 42.220 | |
| SRR5643515 | five period of Gastrodia elata | 65.780 | |
| SRR5643524 | five period of Gastrodia elata | 52.520 | |
| SRR5643525 | five period of Gastrodia elata | 55.430 | |
| SRR5643528 | five period of Gastrodia elata | 67.190 | |
| SRR5643658 | five period of Gastrodia elata | 58.220 | |
| SRR5643659 | five period of Gastrodia elata | 83.870 | |
| SRR5643660 | five period of Gastrodia elata | 97.140 | |
| SRR5643661 | five period of Gastrodia elata | 87.520 | |
| SRR5643662 | five period of Gastrodia elata | 121.130 | |
| SRR5643663 | five period of Gastrodia elata | 87.650 | |
| SRR5643664 | five period of Gastrodia elata | 86.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 52.560 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 44.830 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 48.990 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 58.000 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 63.390 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 80.040 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 56.950 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 58.260 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 46.430 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 52.340 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 47.020 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 47.020 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 102.94 |
| Juven | Juvenile tuber | 79.67 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 82.28 | |
| Mother_Juven | Mother tuber of Juvenile | 64.96 |