Detail information of GWHGAAEX011815/evm.TU.scaffold_4.129


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743831802|ref|XP_010934801.1|6.90E-36PREDICTED: LYR motif-containing protein At3g19508 [Elaeis guineensis]
Swissprottr|Q1G3M2|LYRM9_ARATH3.00E-30LYR motif-containing protein At3g19508
trEMBLtr|D7SXW1|D7SXW1_VITVI8.00E-35Putative uncharacterized protein {ECO:0000313|EMBL:CBI22511.3}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001126835412684567-
Transcript Sequence

Network for GWHGAAEX011815

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05347.14Complex1_LYR5542.70E-07
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.500
SRR2545915Juvenile tuber14.640
SRP108465SRR5643513five period of Gastrodia elata39.900
SRR5643514five period of Gastrodia elata51.860
SRR5643515five period of Gastrodia elata42.510
SRR5643524five period of Gastrodia elata42.000
SRR5643525five period of Gastrodia elata13.930
SRR5643528five period of Gastrodia elata9.850
SRR5643658five period of Gastrodia elata8.170
SRR5643659five period of Gastrodia elata46.970
SRR5643660five period of Gastrodia elata46.030
SRR5643661five period of Gastrodia elata67.130
SRR5643662five period of Gastrodia elata49.430
SRR5643663five period of Gastrodia elata44.490
SRR5643664five period of Gastrodia elata57.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.500
SRR6049655Rhizomagastrodiae_C368-T10_good_136.360
SRR6049656Rhizomagastrodiae_C368-T07_good_133.270
SRR6049657Rhizomagastrodiae_C368-T07_good_121.240
SRR6049658Rhizomagastrodiae_C368-T04_good_124.910
SRR6049659Rhizomagastrodiae_C368-T04_good_117.830
SRR6049660Rhizomagastrodiae_C368-T01_good_125.710
SRR6049661Rhizomagastrodiae_C368-T04_good_126.300
SRR6049662Rhizomagastrodiae_C368-T01_good_137.670
SRR6049663Rhizomagastrodiae_C368-T01_good_130.540
SRR6049664Rhizomagastrodiae_C368-T10_good_144.350
SRR6049665Rhizomagastrodiae_C368-T10_good_144.350
SRP279888GastroGastrodia elata tuber 83.60
JuvenJuvenile tuber52.81
Mother_GastroMother tuber of Gastrodia elata 19.01
Mother_JuvenMother tuber of Juvenile 25.90