Detail information of GWHGAAEX011819/evm.TU.scaffold_4.133


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719998184|ref|XP_010255332.1|7.03E-160PREDICTED: uncharacterized protein LOC104596043 isoform X1 [Nelumbo nucifera]
trEMBLtr|W1NGR7|W1NGR7_AMBTC5.00E-138Uncharacterized protein {ECO:0000313|EMBL:ERM95002.1}
TAIRAT4G256105.00E-75C2H2-like zinc finger protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001127593262767978+
Transcript Sequence

Network for GWHGAAEX011819

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.520
SRR2545915Juvenile tuber91.960
SRP108465SRR5643513five period of Gastrodia elata43.550
SRR5643514five period of Gastrodia elata46.660
SRR5643515five period of Gastrodia elata39.880
SRR5643524five period of Gastrodia elata38.520
SRR5643525five period of Gastrodia elata44.760
SRR5643528five period of Gastrodia elata52.660
SRR5643658five period of Gastrodia elata46.910
SRR5643659five period of Gastrodia elata58.700
SRR5643660five period of Gastrodia elata69.110
SRR5643661five period of Gastrodia elata63.700
SRR5643662five period of Gastrodia elata85.460
SRR5643663five period of Gastrodia elata73.410
SRR5643664five period of Gastrodia elata89.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_154.720
SRR6049655Rhizomagastrodiae_C368-T10_good_147.850
SRR6049656Rhizomagastrodiae_C368-T07_good_148.300
SRR6049657Rhizomagastrodiae_C368-T07_good_158.850
SRR6049658Rhizomagastrodiae_C368-T04_good_153.340
SRR6049659Rhizomagastrodiae_C368-T04_good_162.250
SRR6049660Rhizomagastrodiae_C368-T01_good_155.470
SRR6049661Rhizomagastrodiae_C368-T04_good_154.200
SRR6049662Rhizomagastrodiae_C368-T01_good_153.520
SRR6049663Rhizomagastrodiae_C368-T01_good_162.870
SRR6049664Rhizomagastrodiae_C368-T10_good_147.010
SRR6049665Rhizomagastrodiae_C368-T10_good_147.010
SRP279888GastroGastrodia elata tuber 58.83
JuvenJuvenile tuber46.92
Mother_GastroMother tuber of Gastrodia elata 75.04
Mother_JuvenMother tuber of Juvenile 169.27