Detail information of GWHGAAEX011821/evm.TU.scaffold_4.137
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|16126205|ref|NP_420769.1| | 2.00E-08 | cicA protein [Caulobacter crescentus CB15] |
| nr | gi|719998169|ref|XP_010255326.1| | 0 | PREDICTED: probable glycerol-3-phosphate acyltransferase 8 [Nelumbo nucifera] |
| Swissprot | tr|Q9LMM0|GPAT4_ARATH | 0 | Glycerol-3-phosphate 2-O-acyltransferase 4 |
| trEMBL | tr|G7LBQ7|G7LBQ7_MEDTR | 0 | Glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AET02045.1} |
| TAIR | AT1G01610 | 0 | glycerol-3-phosphate acyltransferase 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 2781899 | 2793058 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011821
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12710.6 | HAD | 26 | 205 | 5.00E-18 |
| PF01553.20 | Acyltransferase | 301 | 391 | 1.30E-06 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13508 | GPAT | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Glycerolipid metabolism | map00561 | ||
| Glycerophospholipid metabolism | map00564 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016746 | Molecular Function | transferase activity, transferring acyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.000 |
| SRR2545915 | Juvenile tuber | 9.640 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 31.240 |
| SRR5643514 | five period of Gastrodia elata | 16.430 | |
| SRR5643515 | five period of Gastrodia elata | 25.810 | |
| SRR5643524 | five period of Gastrodia elata | 19.260 | |
| SRR5643525 | five period of Gastrodia elata | 12.970 | |
| SRR5643528 | five period of Gastrodia elata | 15.910 | |
| SRR5643658 | five period of Gastrodia elata | 14.850 | |
| SRR5643659 | five period of Gastrodia elata | 22.550 | |
| SRR5643660 | five period of Gastrodia elata | 20.460 | |
| SRR5643661 | five period of Gastrodia elata | 27.990 | |
| SRR5643662 | five period of Gastrodia elata | 27.660 | |
| SRR5643663 | five period of Gastrodia elata | 23.850 | |
| SRR5643664 | five period of Gastrodia elata | 9.230 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.890 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 28.560 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.720 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.590 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.470 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.410 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 12.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.700 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 20.960 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.460 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.460 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 11.49 |
| Juven | Juvenile tuber | 5.19 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 40.56 | |
| Mother_Juven | Mother tuber of Juvenile | 21.19 |