Detail information of GWHGAAEX011829/evm.TU.scaffold_4.145


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG46585.00E-15Apoptotic ATPase
nrgi|672207915|ref|XP_008779942.1|7.74E-41PREDICTED: putative disease resistance protein RGA3, partial [Phoenix dactylifera]
Swissprottr|Q7XBQ9|RGA2_SOLBU1.00E-19Disease resistance protein RGA2
trEMBLtr|K3Y4Q7|K3Y4Q7_SETIT3.00E-33Uncharacterized protein {ECO:0000313|EnsemblPlants:Si009195m}
TAIRAT3G144605.00E-15LRR and NB-ARC domains-containing disease resistance protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001129642552965280+
Transcript Sequence

Network for GWHGAAEX011829

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00931.21NB-ARC1852891.20E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043531Molecular FunctionADP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.320
SRR2545915Juvenile tuber26.840
SRP108465SRR5643513five period of Gastrodia elata2.880
SRR5643514five period of Gastrodia elata4.570
SRR5643515five period of Gastrodia elata3.410
SRR5643524five period of Gastrodia elata4.100
SRR5643525five period of Gastrodia elata5.590
SRR5643528five period of Gastrodia elata2.640
SRR5643658five period of Gastrodia elata3.320
SRR5643659five period of Gastrodia elata9.240
SRR5643660five period of Gastrodia elata10.010
SRR5643661five period of Gastrodia elata11.200
SRR5643662five period of Gastrodia elata9.410
SRR5643663five period of Gastrodia elata9.790
SRR5643664five period of Gastrodia elata12.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.190
SRR6049655Rhizomagastrodiae_C368-T10_good_15.250
SRR6049656Rhizomagastrodiae_C368-T07_good_118.870
SRR6049657Rhizomagastrodiae_C368-T07_good_114.690
SRR6049658Rhizomagastrodiae_C368-T04_good_121.560
SRR6049659Rhizomagastrodiae_C368-T04_good_122.590
SRR6049660Rhizomagastrodiae_C368-T01_good_124.170
SRR6049661Rhizomagastrodiae_C368-T04_good_129.800
SRR6049662Rhizomagastrodiae_C368-T01_good_111.630
SRR6049663Rhizomagastrodiae_C368-T01_good_122.790
SRR6049664Rhizomagastrodiae_C368-T10_good_110.140
SRR6049665Rhizomagastrodiae_C368-T10_good_110.140
SRP279888GastroGastrodia elata tuber 15.80
JuvenJuvenile tuber12.24
Mother_GastroMother tuber of Gastrodia elata 3.80
Mother_JuvenMother tuber of Juvenile 6.97