Detail information of GWHGAAEX011836/evm.TU.scaffold_4.152


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|674883798|emb|CDY48651.1|8.65E-17BnaC07g27580D [Brassica napus]
trEMBLtr|A0A078IF72|A0A078IF72_BRANA3.00E-17BnaC07g27580D protein {ECO:0000313|EMBL:CDY48651.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001130317033032736-
Transcript Sequence

Network for GWHGAAEX011836

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.530
SRR2545915Juvenile tuber44.140
SRP108465SRR5643513five period of Gastrodia elata11.140
SRR5643514five period of Gastrodia elata17.410
SRR5643515five period of Gastrodia elata18.940
SRR5643524five period of Gastrodia elata11.260
SRR5643525five period of Gastrodia elata90.710
SRR5643528five period of Gastrodia elata77.770
SRR5643658five period of Gastrodia elata154.310
SRR5643659five period of Gastrodia elata28.110
SRR5643660five period of Gastrodia elata39.650
SRR5643661five period of Gastrodia elata36.770
SRR5643662five period of Gastrodia elata43.610
SRR5643663five period of Gastrodia elata45.760
SRR5643664five period of Gastrodia elata65.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.740
SRR6049655Rhizomagastrodiae_C368-T10_good_15.950
SRR6049656Rhizomagastrodiae_C368-T07_good_16.560
SRR6049657Rhizomagastrodiae_C368-T07_good_16.480
SRR6049658Rhizomagastrodiae_C368-T04_good_13.890
SRR6049659Rhizomagastrodiae_C368-T04_good_15.470
SRR6049660Rhizomagastrodiae_C368-T01_good_16.590
SRR6049661Rhizomagastrodiae_C368-T04_good_14.250
SRR6049662Rhizomagastrodiae_C368-T01_good_14.490
SRR6049663Rhizomagastrodiae_C368-T01_good_18.480
SRR6049664Rhizomagastrodiae_C368-T10_good_13.950
SRR6049665Rhizomagastrodiae_C368-T10_good_13.950
SRP279888GastroGastrodia elata tuber 27.29
JuvenJuvenile tuber7.83
Mother_GastroMother tuber of Gastrodia elata 14.74
Mother_JuvenMother tuber of Juvenile 11.86