Detail information of GWHGAAEX011853/evm.TU.scaffold_4.171
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|428770624|ref|YP_007162414.1| | 3.00E-27 | serine/threonine protein kinase [Cyanobacterium aponinum PCC 10605] |
| KOG | KOG1187 | 1.00E-178 | Serine/threonine protein kinase |
| nr | gi|743835161|ref|XP_010935734.1| | 0 | PREDICTED: probable receptor-like protein kinase At5g47070 isoform X2 [Elaeis guineensis] |
| Swissprot | tr|Q9LFP7|Y5158_ARATH | 9.00E-121 | Probable receptor-like protein kinase At5g15080 |
| trEMBL | tr|J3LIF9|J3LIF9_ORYBR | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:OB02G44260.1} |
| TAIR | AT3G09830 | 1.00E-178 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 3292493 | 3332272 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011853
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 90 | 366 | 1.80E-48 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 35.240 |
| SRR2545915 | Juvenile tuber | 33.960 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 34.190 |
| SRR5643514 | five period of Gastrodia elata | 36.890 | |
| SRR5643515 | five period of Gastrodia elata | 35.660 | |
| SRR5643524 | five period of Gastrodia elata | 38.250 | |
| SRR5643525 | five period of Gastrodia elata | 51.260 | |
| SRR5643528 | five period of Gastrodia elata | 56.100 | |
| SRR5643658 | five period of Gastrodia elata | 59.510 | |
| SRR5643659 | five period of Gastrodia elata | 39.980 | |
| SRR5643660 | five period of Gastrodia elata | 42.150 | |
| SRR5643661 | five period of Gastrodia elata | 38.620 | |
| SRR5643662 | five period of Gastrodia elata | 42.830 | |
| SRR5643663 | five period of Gastrodia elata | 36.210 | |
| SRR5643664 | five period of Gastrodia elata | 37.360 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 30.170 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 29.530 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 29.780 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 33.940 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 36.590 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 46.240 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 31.330 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 35.600 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 29.230 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 31.890 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.970 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.970 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 55.33 |
| Juven | Juvenile tuber | 28.34 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 65.38 | |
| Mother_Juven | Mother tuber of Juvenile | 43.19 |