Detail information of GWHGAAEX011859/evm.TU.scaffold_4.182


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01671.00E-17FOG: Armadillo/beta-catenin-like repeats
nrgi|593798074|ref|XP_007162075.1|7.75E-34hypothetical protein PHAVU_001G121600g [Phaseolus vulgaris]
Swissprottr|Q9SNC6|PUB13_ARATH3.00E-18U-box domain-containing protein 13
trEMBLtr|V7CVA4|V7CVA4_PHAVU3.00E-34Uncharacterized protein {ECO:0000313|EMBL:ESW34069.1}
TAIRAT3G465101.00E-17plant U-box 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001134827203485669+
Transcript Sequence

Network for GWHGAAEX011859

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00782.19DSPc1552332.90E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016311Biological Processdephosphorylation
GO:0016791Molecular Functionphosphatase activity
GO:0008138Molecular Functionprotein tyrosine/serine/threonine phosphatase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.710
SRR2545915Juvenile tuber5.850
SRP108465SRR5643513five period of Gastrodia elata0.410
SRR5643514five period of Gastrodia elata0.100
SRR5643515five period of Gastrodia elata0.380
SRR5643524five period of Gastrodia elata0.900
SRR5643525five period of Gastrodia elata0.420
SRR5643528five period of Gastrodia elata1.390
SRR5643658five period of Gastrodia elata1.050
SRR5643659five period of Gastrodia elata0.330
SRR5643660five period of Gastrodia elata0.240
SRR5643661five period of Gastrodia elata0.500
SRR5643662five period of Gastrodia elata1.360
SRR5643663five period of Gastrodia elata0.470
SRR5643664five period of Gastrodia elata1.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.770
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.640
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_11.100
SRR6049659Rhizomagastrodiae_C368-T04_good_10.870
SRR6049660Rhizomagastrodiae_C368-T01_good_10.540
SRR6049661Rhizomagastrodiae_C368-T04_good_10.260
SRR6049662Rhizomagastrodiae_C368-T01_good_10.590
SRR6049663Rhizomagastrodiae_C368-T01_good_11.460
SRR6049664Rhizomagastrodiae_C368-T10_good_10.510
SRR6049665Rhizomagastrodiae_C368-T10_good_10.510
SRP279888GastroGastrodia elata tuber 0.12
JuvenJuvenile tuber0.15
Mother_GastroMother tuber of Gastrodia elata 0.48
Mother_JuvenMother tuber of Juvenile 1.14