Gene detail

Detail information of GWHGAAEX011867/evm.TU.scaffold_4.191

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672179015\|ref\|XP_008809664.1\|	2.47E-148	PREDICTED: uncharacterized protein LOC103721293 isoform X4 [Phoenix dactylifera]
trEMBL	tr\|M0TDB2\|M0TDB2_MUSAM	3.00E-117	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P36720_001}
TAIR	AT4G28760	4.00E-65	Protein of unknown function (DUF3741)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	3687300	3694048	+

Transcript Sequence
>GWHTAAEX011867 GTTATAAGGCCCGTGCACGCTGTTAATTTCTGCTTAAAAGCTTTCTCGCACTGATCTCGCCTACTGCCGTCGCTGTCGTGTGGAGAAAATCGGAGAATCGCCGGCGATAATCTCCGGTGGAAAGCCGACGGCGATCACTTCCGGCGAATAGTCGGCCTCAACGACAGATCTTGAACTGTTTGGGTTCTAGAAGCGGCCAGATCGCACCTTTTGTTCCTGATTCTTGATTATGATATTCTAGTTCTGTTTAGAGCTCCACTGCAGTCGTCAAAAGGAAAATTGTCGCAAACGCAAGCTTGGCTAAAGATATAAATGCTTCGGGCAAAAGAAGTTTAGCTGATATGTGAGAAAGGTCAATATGTTTGACTTGAACATTGGTGTGGTTAGAGCCAAGCTACTTACTGATAAAGCGCAGGGAGATGGTTATGCAGTTCATAAGGACCGGCCTGATTTTGTGAAGAAAGCAATTAATATACTTGGTTCTCAGATATGGAAGAGCTCTGGAAGGAGATTGAGTGAAACGCCAATGAAGATGCTAATAGCGCAGGAGCTATCAAGTGCAATTGAATTGAAGGAAAAGCCACCAAGTGTTGTTACAAAATTAATGGGATTGAATTCATTGCCCCTTCAACCAAAAATTTTGGCTTGCAAGAGAAACATACAAGAGACTGATTCACTCCAGCGTACAAGCAAGGGCTTTCAAAACCACCAGCAAAAGGAAGAAGACAGCTTTATCCAGATGAAGAACAGGAATGACTTGCACATCCATGACAAGAAGTATGAAGATGTGTATGATGTTAAGCTGCAGCATTCAAGTAATGATCAATTAGTGACTGAAAAGCTACTTCATGGAGACTGCAATGGAAACTTGACTGAGAAGAGAATGGCTCTTGTTCACCAAAAGTTTATTGAAGCAAAGCGCCTAGCTACTAATGAAAAATTTCTCCAATCAAAAGAGTTCAAAGATGCTCTTGAAGTTCTAAATTCAAATAAAGATTTGTTTCTCAAGTTGTTGGAAGACCCAAATTCTTTATTCTCTAATCAACTTGAAGAGCTCCAGCAGACTAGTTTGGTGGGAACCCAGGCCAAATGTATAACCGTGCTGAAACCAACTCCAATTGATATAGATAATGAGAGATGCCCGAGGAAGAACCAATATGCATTTGGTGAAGAGAATAGGGACGTCGATGAACCTGAGTTGAGCTCTAGCTTTTTTCTCCCAAAGACTGAAGTTGTATCTCAGCCCACCAGAATTGTGGTTCTAAAGGCTACCTCTGCAATATCTCATGAAGCGCGGACCAATCTTGATTCAGACATTTCCTTGCCGGTTCCAGAAAGTAGAAGCACGTATGAAAATTTTAGAACTGATGGAGATGAACGATCAAGTAAAGTTGGCAATAAATTTATTCATAAATTGCAAAAAGGTTCAAGCTTACACAATGATGAATACCAAAGAACTTCTGTCCTAGCCAATGGATATGTAGCTGATGAGAGTTCTCTTAGTAGGTCTGCAACTGATTACAGAGAAGGAAGCAGCGACTGCAGCGGCTCTGACTTGATGGCTCTATGTTCACCTTGGGTTCATTTGAGATCTGGTAGTACAGGTTCCTTGTCATCCTTTGGTCATGGGTCTTATTCGCTTGAGTCTCCCATTAGTACAGAGGCCAAGAAACGACTTTCTGAAAGGTGGGAGTCACTCACTTCAAATGATGTTAACCATGAACAAGCTTATTATCGGAAGAGCTCAAGTACTTTGGGTGAGATGCTTGCCATTCCTGAGGTAAAGAAAGAAGAAGAGGAGGCCGATAAGCTTGCCACATCGTCGTGTGTTACCTGCAGTGAAGGGCAGCGCATGAGTACGACAAGTATATGTTCAACTTCCAGTAGGATGCAGGAAAATGAACAGTCTCCTAAGAACTTTGCAAGATCCAAGTCTCTTCCGGCTTCACCATGCTTCGAAAGCATTAGGAAGAGCGAAAAGATTTCTCGTGCACGCTCTAGCAAATCCTCTCTTCTCAATCAGGTGCCAAAAATGAAAAACGAAAAATCTTTTAAGGATAAAGTTTCAGGGCTATTCTTCTCCGGGATGAAGAAATTGGTGATGGTCAACCCTACCCTCTCCCCTTCCAGTCCTGATGATAGATTCCAGTCTGCCATTTCTTTAGCTGAAAGAAGTGACAACTTCCCAAAATTTATCCTTAATAGGATATCTGATGAACATCCTCCAAAAACTCTGGAGGCAAAATCCACCAAGTTTTCTTCTCCTATTTCAATCAGGAGAGAAGAAAAGCATGGGAAAACCCCTCTAAAGGGCATCCGCTCCATTGAAAAGCTTTGGAAATCTGAAATCTCCAGAGAGAACCTGAACCAACCTAATCACGCCTCAGCATTTGAAAGATCATTTCATGAAGATTTTCTTCCTAATTTCTCCCATTCTTCGTCGCGTGTTATAACCGGAAATCCACAAGCAGTGTGTAGATCTCCGCCGATCAGTTCGGTGAGGCGGTCCCTGAGCTCGGAAAGGGCGCAGCCGGACAGCCCGGCGGCGTCGTCGAGTTCGTCGAAGCTCTTCAGGCTCTTCTCCAGAGAAGACGAGGAGCGCGAACGGGCGGATTTCGTCGCAAAGCTGCTCTCATCGTCGAGCTTCGCAGACGAACGGTGCTGCTGCTGCTCCGCCTCAACGCTGCTTTCCAAATCGCACTCCCTCGAAAGCCCGCTGGATCCGGTTTTTCTGTGCGAGCTCTTGGGGAGTCAAGGGGAGGAGGAGGCCAAGAAGCGAAGGGAGAAGAGGTCGAACCAGAAGCTCTATTTCGACTGCGCCAACATTGCCCTGAAGGGCATCATCTCCTCCGCGCTGGCCGATGCCTCCCCGTGGCCTTCCAAACCCTCGAAAACGAATCTGACGGTGGCCGACGCAGTGCGGCGCCGATTGAGGGATTGGTTTTCCGAGGACGATGATGATGAACAGTGCGGGAAGAGACGGTGGCAGTGCGTGGACTCTTTGGCGAGGAAGGAGGCTGCTGGGTTGGCTGATTCTTCTTCGCTGTGGCTGCAAATGGATGAGCTGGGCGGAGAGGTTTGCGAAAGGCTGCTGGAAGAGCTGCTTCAGGATACCCTCGCTCTTCTCTGCTGATTTCTTCTCTCCTTTTGCTCTTTCGCGCCTGATTATTGCCATATTATTAATTTGGCATTCGGTGGCAGGTCGCAGTATCGATCTTACCCCGATTGTAAAAACTTCCTAGCGTTGCATTTTGTCATTTGTTTTTTTTAAATACCATAATTTTCTTCAAACTTTAGACAAAATTGACTCAAATTGGGGGAACTGTAACAGTCCCTTTTCCCTATTTTGGCATCAATTCAC

Network for GWHGAAEX011867

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12552.7	DUF3741	181	224	1.70E-22
PF14309.5	DUF4378	752	917	8.80E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	22.570
SRP064423	SRR2545915	Juvenile tuber	18.290
SRP108465	SRR5643513	five period of Gastrodia elata	15.880
	SRR5643514	five period of Gastrodia elata	16.200
	SRR5643515	five period of Gastrodia elata	13.610
	SRR5643524	five period of Gastrodia elata	17.100
	SRR5643525	five period of Gastrodia elata	18.350
	SRR5643528	five period of Gastrodia elata	12.590
	SRR5643658	five period of Gastrodia elata	23.410
	SRR5643659	five period of Gastrodia elata	8.850
	SRR5643660	five period of Gastrodia elata	8.940
	SRR5643661	five period of Gastrodia elata	9.020
	SRR5643662	five period of Gastrodia elata	10.870
	SRR5643663	five period of Gastrodia elata	12.390
	SRR5643664	five period of Gastrodia elata	12.300
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	15.090
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.310
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.830
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.900
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	14.060
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	16.290
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.020
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.060
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.110
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.070
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.640
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.640
SRP279888	Gastro	Gastrodia elata tuber	14.52
	Juven	Juvenile tuber	23.50
	Mother_Gastro	Mother tuber of Gastrodia elata	7.75
	Mother_Juven	Mother tuber of Juvenile	9.25