Gene detail

Detail information of GWHGAAEX011868/CADD00949.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	3695336	3698957	+

Transcript Sequence
>GWHTAAEX011868 TTCCAAACAAAAAATAAATTACATCAATTATATATATTTACAAATAAAATTATCACATCATCCTCATTTTTATACCCCTCCCTCCCTCAACCTAATCTCCCGAATCTCTAGCCGCTTTCTTTTGGCAAGCCAATCTCCCGAAAAGTGCACGAGCAACATTCCTTTTCCTCTTCCCGTTTGCGTCCTTCACCTCTCGTTCGAGCGATCCTTCACCTCTCGTCCCTAAACATTGCTAAGGTTAGCGCCGCCTGAAGACTTATTCGCACCGAGCAGCTTTCCTTTTTCCCTTTTCCCGTTTTGCTCCCGCTAGGGTTTGCGGCGACGCTAACCGAGCGATCCTTCACATCTCGATCCTTCACGCCTCGTCCTTAAGGTACGCCGCAGCTGAGATTGACGACTCATGAACGGTTGGTCGCGTCTTACGGTTTGATCTTTCTCCCCTTTAAAATCCATTTGCAAAATTTTCTGAGCGATAAAAAAGAACTTTGTATTGGTAGAGAATGGTTGTTTTCATCTCTGTTGGTCGTTCTCGGCTCGACTGTTTTTTCCCTCTGTTTGGAGGCGAACTTTCTGGTTCATCTCTGTAATTCGATGTGAGAGTAATTACATCTTCTTAAAGGGTTCTATATCAATGATGAATGTTTCATAATTTTACATGTTCCACTTTTTAATTCAGGCTATGCAAAATTTTCAATATAATTTGGCTTTGTTTCATATTATTCAAGTTGAACACAAATATTTTCATTTGAAAAACATCTGTTTCAATACAATTTGTCTTTTTTTTTCGTAGTAAAGTTTTTTATGTTCTAAAGTATGAAGGGTTAAATTGCTCTCTGCTGTTTTGTTTTCCCTCTGTTTAGAAGCAATCTCTGCTCAGCTTTTAGAAATTGCCAATTATGATTGCATTGTATTGTTTGTTTTGTAATATTTTGAACCTGATCAAAATGTCCTCAATTAGAATTAAAAGCATTGGCTGCTTCTTATCAGGTGAGTAGTATGTGCAGTACATTTGTTTTTTCTCTGTGCAACACTAACAATGCTTTTAACTTCAATTTTATGTATGGCTTTTAGGTAAAACATCAGCTAGCCTGATTAGCTGCAATTGTTATGTATACTTGAACGATTTGTGTAGAAAACTCCTTACCAGCTATTTATATGGAAACTGTCCCCAAGCCGCATGAATTATTACTTGGTTATTTTAACTTGATTCATAGATAATTTTTATTGGACATAATAAGAATTTTCAGTTTGAATTTTTGGATGAGAAACTCCTTAGATACACTAGAGAATGCTGCTGGTGCGAAAAACATTCTAAATAGTTGTTAAGAATTAAAGAAATTGGCTCTAAGAATATATGGACAAACTAGGGTCAAATTTGCTATCTAAATTATTTGAGGGTGGGCTATCTAATATGAACCATACGATTTACAGTCTTGTGCATTAATCATCTTTCCAATGTGATTTTTGTCACTCAATTTAGTGATGGCTTTTGATGAGCAGATAATGCTGCAGGTGCGAAATTGCTTGATCTTAGGACATGTTTCTGCAGGTGCGAAATTGCTTGATGCTCTATTCACTAAGTCTAGGATGTTTTCTTCTGGATTGACCAAGGGTTGTATGATTTGCAGAATTATGAGTGTAATGTAAATCCCCACAATTCTATGTCACACTTATTTGGTTTAATGGATTCCTAATATGAACAAAATTAGTATATTTTATTTTGATTGCACTCTTGTAGATTCTATTTGATATTTCTGGGAAGAGAAAAGTGATACTTCTCGAAAATATTGAAGATAATAATTTTTGAGTGGTTCATTGCTATTTCAATATTGAATGGTTCATTGTTATTTCATTATTGAATGGTTCATGGCCATTTCATTATTGAATGGTTCATTATTGAATGCCAGCTGCCATGTCATCCAGAATTTGAGGGGTATTAGAGGGGGGGTACTGTATCATTGTCCTTTATTAAAAGGTTGTTTATAAATATCATTGCATCTGTTAGCCAGGTTTCAGTTATTCAGTGCACCATCTGTTAGCATCATGTGCCATTGCAGTCTTCTTCTTGTTGGATTATGTTGAGTTCTTCTCAAGTTATAATATTCAGCTACTTTCTAGATATACAAGCATGATTATTCTTTTATGAAAACCTTTGCAGCATCAGACAGTAAAGAGAGGTGTTTGCTACAGCATAGTTTGTATTTTATATGGTGAAGGTGATGAGTCTTTATGTGTTTCAGCTTTATGTGGTATTATTATTTGTAATATTCGGAAAGAAAAATGCTAAAGAATCATCAAAATCATGCTAGTTGTGTAATTACAATAAAGAAGGATATTATTTTTCAATTTGACGTGACTTGTGGTAAAGAAAGTGACAGATTTGATTTGCATTGATTGGCTGTGATAAAATTCGCTCTAAGCAGGATGGCTGGCCAACTTGATCAAATATCTTCTCTATTTTTGAATAGATACTTCTTGATCTTGAACAGATACTATGGTCAGCAACCGTTTAGAGATATTTGAGCCATAGTAAAATCTTGTAGTCAAATCTTGTTGCATGAAGTTTCCTGCCAATGCAAGGCCTTGGAAAGGGTTAGGCCACTCGAAACTCGAACTGTTCTTGGAAAGTAAAATTGGTGTGGTCTTTAAGTTCTCCTCTCCCACCAGAGGTGTAAGTGCTTCGTGTTCATCACTTCATCCATCTCGGGCTTACAAGTCTTCATTTAGATTGGTTGGAAGTAAATTTGTCTTCATTTGCTATATGATTTTTGACATCTTACTACTTCGCATGTCAAACTTCATCTTCTGTTGAGGAAAACATGACTTATCATTCTATGAGGAAGGGTGTGAGATAGCTCACCCATTTACATTTTTTACAATCAAAATATTTTGGTATGATTATCTATTAATGATTTATATAAGAATGTATTTGCGGATTTTAATTTCATTGGGGTCTAGTCTCTGAATTTTATTAACTACAAGCATATTTTATTAAAGCTCCCCATCTAGTGAGACTAAGGCTTAGTGGTCTTGTGCATGAATCATTTTCCAATGTGATTTTTGAGCAGTACAATTATTTCTTATACAAGATATGGCACAGTAGTGGTCAATTTGATTTACGGGATTTAAGTTGGATAGAAAAATAGAGATGCAGGTGCGAAATTGCCGCAGCTTAAGGAGACAAAGAAATGCTGCAGGTGCAGGTGGATGAACTTGAATCTCGGACTATTGTAATGAATGAAAAATGATGAAAATTTTGCAAATGCTGCTGTCTCAAGCTCTCAAATACTGAAAAATAGTTTCTCAAAGTAGAAATAGAGAAATCAAAAGAGGCTAAATCATTGAAATGTGATGTAGCTCAAATAATGTATTTGATGTTGAACAAAGTTGTTTTAAGTTGTTTTGAAGATAATTTTAGATTGAAAATGTTTCTTCAAATAATTTATGTATGTATTTACTGTACTTTGCTTCTAATTAACAAATTTTTAATGTGATATAGCTCAAATGACAGAGCGCTCA

Network for GWHGAAEX011868

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX011868
FQTKNKLHQLYIFTNKIITSSSFLYPSLPQPNLPNLPLSFGKPISRKVHEQHSFSSSRLRPSPLVRAILHLSSLNIAKVSAARLIRTEQLSFFPFPVLLPLGFAATLTERSFTSRSFTPRPGTPQLRLTTHERLVASYGLIFLPFKIHLQNFLSDKKELCIGREWLFSSLLVVLGSTVFSLCLEANFLVHLCNSMELHLLKGFYINDECFIILHVPLFNSGYAKFSIFGFVSYYSSTQIFSFEKHLFQYNLSFFFVVKFFMFSMKGIALCCFVFPLFRSNLCSAFRNCQLLHCIVCFVIFTSKCPQLELKALAASYQVSSMCSTFVFSLCNTNNAFNFNFMYGFVKHQLALAAIVMYTTICVENSLPAIYMETVPKPHELLLGYFNLIHRFLLDIIRIFSLNFWMRNSLDTLENAAGAKNILNSCELKKLALRIYGQTRVKFAIIIGWAIYEPYDLQSCALIIFPMFLSLNLVMAFDEQIMLQVRNCLILGHVSAGAKLLDALFTKSRMFSSGLTKGCMICRIMSVMIPTILCHTYLVWIPNMNKISIFYFDCTLVDSIYFWEEKSDTSRKYRFLSGSLLFQYMVHCYFIIEWFMAISLLNGSLLNASCHVIQNLRGIRGGVLYHCPLLKGCLISLHLLARFQLFSAPSVSIMCHCSLLLVGLCVLLKLYSATFIYKHDYSFMKTFAASDSKERCLLQHSLYFIWRVFMCFSFMWYYYLYSERKMLKNHQNHASCVITIKKDIIFQFDVTCGKESDRFDLHLAVIKFALSRMAGQLDQISSLFLNRYFLILNRYYGQQPFRDIAIVKSCSQILLHEVSCQCKALERVRPLETRTVLGKNWCGLVLLSHQRCKCFVFITSSISGLQVFIIGWKICLHLLYDFHLTTSHVKLHLLLRKTLIILGRVDSSPIYIFYNQNILVLSINDLYKNVFADFNFIGVSLNFINYKHILLKLPIDGLVVLCMNHFPMFLSSTIISYTRYGTVVVNLIYGIVGKNRDAGAKLPQLKETKKCCRCRWMNLNLGLLMKNDENFANAAVSSSQILKNSFSKKRNQKRLNHNVMLKCICTKLFVVLKIILDKCFFKFMYVFTVLCFLTNFCDIAQMTERS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	34.200
SRP064423	SRR2545915	Juvenile tuber	25.570
SRP108465	SRR5643513	five period of Gastrodia elata	18.840
	SRR5643514	five period of Gastrodia elata	22.610
	SRR5643515	five period of Gastrodia elata	17.870
	SRR5643524	five period of Gastrodia elata	23.250
	SRR5643525	five period of Gastrodia elata	19.940
	SRR5643528	five period of Gastrodia elata	15.640
	SRR5643658	five period of Gastrodia elata	25.780
	SRR5643659	five period of Gastrodia elata	17.020
	SRR5643660	five period of Gastrodia elata	22.810
	SRR5643661	five period of Gastrodia elata	17.360
	SRR5643662	five period of Gastrodia elata	17.370
	SRR5643663	five period of Gastrodia elata	22.540
	SRR5643664	five period of Gastrodia elata	16.210
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	36.380
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	32.470
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	31.510
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	51.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	62.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	67.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	46.770
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	51.410
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.180
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	26.030
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.250
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.250
SRP279888	Gastro	Gastrodia elata tuber	31.61
	Juven	Juvenile tuber	46.47
	Mother_Gastro	Mother tuber of Gastrodia elata	37.29
	Mother_Juven	Mother tuber of Juvenile	78.26