Gene detail

Detail information of GWHGAAEX011870/CADD00950.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	3699759	3706880	+

Transcript Sequence
>GWHTAAEX011870 CCAAAATACAGTACACACATTATTACAAAAATAACTTTATTTACATCAATAGCATAAACAAGTGATCCCAAATTATGCTGAGCAAAAAACAAATTTTAATATAAATAATTTTTTTTTTTGAAAATGTTTTAATTAACATTTTTGTTCAATAAAAATACAACAACTCCAATGGCATTTGATCCACAAATATTAGTTGTTTAATTTGAACAGCTCTACTCTGTCTGGCTGGTTGCACTCTTACAGCAAAATCATTTTCACTAAAATATGATGTTGATGAATGATGTGCCAAATTCATCATTACAAACTTTGTGCCCTTGAGAGCCAAAAATTAAGAGTTAAGAAAATATAAGAAAAATACTCTTACAAAATGTGCATTTAAATACAAAAGGTGCATTACCATACTAGCTCAGAGTTGAAGAAAATATCCTTTGTGTGATAGCGGATAAAGCTGAATAAGCCTCATCAATCATGAGCTGAACAGAAGCTACCAAAAGCATTTACATTGCATAACACAAATACAAATTTGGCATATATACATTATTATGTTTGAAAAAAAAAGATTGACTATTTTTATGTATCCCAAAACAAATAAAGACCAAAAGGAGAATTTACCTTTGTGTTAGAATAAAAATAATGACGACACAGTCTGGCAGGTGTTTGAAATATTTATTGATCTACACATTGCTGCAACCAATCTATAAATCCATGTAACCACTTGTTGCATCAAGAATAGCAAAAAGAATTGCTTGAAGAATTTGCAAGACAACAAAATAAAAAATAAGTCATGCAGTTGCATTTAGTACTTTTGATGTGTTGCTTTAGTGAGGTGCCGGGCTCACCAACTAGCTCCTGGTGCAAACCCAATTGAGTAGTAGGTTGTGACCACCCAAAGAAATGATTTGAGCATGGCGATGGGGATTCAGGGAACAAAGTTAGGTAGGGTGAAGACTCATGTGGGGTACAAGTTGAGGTCTCGTTGCTGGTAGAACACTGGCAGCCTGCTTATTGTAAGGGGCAGCTGCGACATGCTATTGAAAATATTGATGGAAATGCCGAAAATAATGGCATTGTTGTACATATCGTTATCTTCTATGCTGTCAGTCTGCCTCGTAGATCCACAGAACATTGTCGACATGATTACCGTTGCAATAAAAATCTTCACAACATATATTCGAAGTTAGATTGTTTTAGTGAAATTTAGCACAACTACAACCACATCCACAAAACCAATCAACAATCTAATGTTCAGTAGCAAGAAGATAAAAGACTAGATCACAACAACCTGCAAGCATTAAATATTCAAAGCAACACAAACATATTTGCCGAAGACCATATTGCTGAGAGATCGAGACTTGAGCAAAAACTGTCACCATCATACACTAGCCTTACCTAGGCCTTACAGTAAAAACCAAGATGCCGGAGAGATCTAGAGCAAAATTGACACCCATACACATCAGCACACCATATAACTTCCAGCTAACCAAACCATCTTAAGAAACAAAGGAAGATGCAGTTTAAACAAGAAAAGGTCTTGTTTAGAAGGAGAGCTCTGATTAGTGATTGCTAATATACTAGTATATTTGAGGGTATATGGCCATCCAAAATTAACCGAGTCTTCATTTCCAAGAAAAAATAACTTGGCTGAGACAAAGGAGATAAGCTCCAAAGGATTATGAATAAAAATTGAATAGAGTTCCAGTAAAAATAAACATTGCTTAAAGACTTTACAAAATTAAACATGCATCAATTCCATACTTACCAGGAGAGGAAAACATACAAGATATGACTATCTTCAATAATAGTTATACACAGCCCACAATTTCACCAATGCCGAAGCCCACAATTTCACCAATAACATCAATAACAAAAAAAATTCAAAATAACCACACTATGTTATACAAAGCTCACAATTGTACCAATGCTTACACAGATAACAAAATTTAAATCTTCAATTCAAAGTGATCAAAACAAAGTTAGTGAAAGCCTCTTTACGAGATTAATGCATACCACCCAGTTACATGTCCAAGATGGTCTCCCCAATCCTGAAGTTTTTATTTTAGGATTGCTTTCCATCTCTCCATGTCTACACAACGATATGCAAAATAAACAGTTTTAATAGCATTTGAACATATATAAAAACAAATTTATACAAATGTGCAAAGTTTCTTAAAACTATCTAATTCATCAAGCGTCACAAATATAAAATGTGTACCTTCAATTCATTAGGTGACATAATCAAAACAACAGAAGGCTCCAGTTCTTCGTTTAGTACATGTTCAACTAATTTCTAGTTTGTTTCTTAGTTATCTCAGTATGATTTCTAATTTGTTTCTTAGTTATCTCAGTATCTAAGTATTGCTATAAAAAAAACTTTTTGGATAACTTATAAAGATCAACAGTAAATTATGTGAAGGTGTTATATAGGGGATGACTAATTAAATATCAAATTATAGCAATTGAAGCATTAGTATATTGGCATAAAAGTAAAGAAAACATTTTGAGCGCCTATATAAAGCAGAAAATAAAAACATAAGAAACAGTTTTACAAATGAATAAAAATATTAAGCCAATAAGAACAAAAGAAACTTGAAAATTACAGCATATGCTTCTTCTTCCCTTTTCTGTCATGATGACTTATAAGTCTCTTGGTTGGCGGGCGTCCTTTTGGGTGTGCGCGAGCAGGATCTTTTATTGCACTTGGAACTCCATGACCACAAAAATCTTTAATCTTTTCTTTAAGCTCTTGTAAGGCAGCTAATGTGTATGCACGAGCCTCATCATTAACTCCCCCAATATAATTAATCTCATTGGCATGTCGTATGCTTTCAACATAATAGTCATCCGATCTACTTTTAATGTTTGTTTGTGAGTTGAAGAATCTAATAAATGAGCAAATTGTTTATTATCCTTTCTCCATCATGAGCTTACTAATTTGTCAGGAATTCTGGCATTCCCTTCTTGACGCAAAACACACAGTATGTGTGAACAAACAGTCCCGCTAAACTGGAATGAGCGGCAAATGCACCACATATCCTCTTCGATGAGATTATAAACAATTCTAAAATCAAGTCTTCTCATTCCATCCCACACAATTACCATATATATTTTAAACGACACATTAAGCTATGCATTTGAGATAATACAGTTCATCAATTTCTTTACTTCATCCTGGAATTTGTAAAATATATTTAAAGTATATGTTTTAGAGAACTGTTCTTCATAAACTAGATTTGAGATAAATTGTGGTTGAGAAATATATGATTTAAAATCAGCTTGAGCTTGTTTTTCGAACTTATCTTTAAGCATTTTCATATTGCTCAACAAATAAATGTAGAGTTGTCTTCGAATTCACGTACCCATCAAAGAAAGCATTTACGCCTTCACTTTGTTGTGTAGTAGACATTCCAGCCCAGAAAAAATCTTTCAAGAATATGGGAACCTAGTTCGCCCTTTTCTCATAAAGAGACGTAAACCAATTAATTTCAATAAGCTGGTATTTGACATCACCGTCAACCAACCGTGTTCAAACTCATCCCCAGACAAAGAGTCATAAACAATAGGTGAAAATTCAGAGATTAACGATTATTTATCTAATCTACCGCCTAGTTTTTCTGACAATTTCTGTATGATATGCCACAAACAAAGACGGTGCTTTGTAGATGGAAACACCTCAAAAATTACATATTCTATTGCTCGACATTGATCAGTTATTATTCCGTTTAGATGTTTATCATGCATGCAAGCTAACATCCGCTTAAACAACCATAAAAATGTTTCACTTGTTTCATCACATAATAATGCACAACCGAAAGAATAGAGTTTTCATGATGATTCACTCACAAATGGTGCAAAGGGCATGTCATACCGATTTGTGAGATATGTGGTATCAAACGTCACAACATCGTCAAAATGATCATATGTCATTTGACACCGCGAATCAGCCCAAATTCAGTCGATTATCATCTGTCACATCAATACTGTAGAAAAATTTTGAGTCTCATTTTGCAATCTTTCAAAATATTTAATTAAAGCAACTACATCCTCATCAACTAAATTCAATGCTTTATGCTTTGTCACAAAATTTCTACAATCCTTTTCAATAAATAAATAATTATCAAATCCCCCACATAGTGTAAACATTGCATTAATAGATTTATTTAGCGAAACTCCAACCTTATTATTAACTATCAACTGTCTTTGGATAATCAAAGGTAGCTCACGGTAGCATCGCATAAAACGAACCATTTGAGGCTCCAAATCATGATTATGCTCCAAGAAAATATCATCAATTACACATTTGGAGTTTAAACAACGATCTAAAATAACAAATTTTATCTTGCAACATGTTGTTATTATCAGTTTTCTACGTAATTTTGTTATTTTTGTTGTTACATGTGGCTTCCTCTTTACAACAAGTAAACACATAATAAGTTTTTTGCCCATAAAAATTATGATTTGAACGTTTTCTAATGCCAAAATCACTATAATACCCATAAATTTTGTACTATTTAAATGCTTCTTCAAGAGAACTAAATCTCATTCCAATCTCAGAGATTTAAAAAAAAAATTCGTTAGTTTCAAATACATGATCACTTTCATTCACACAATTGTCTAAAATCTCTAAACATGCATTAATAGAATTAAAACTAGTCAATGCTGTAATAATGTAATAATATAATATTTTGTTCCAACATAATAATTAATATGCACAATAATTAACCTGAGTTGTTATCTACTAGCAATTCTTTTTCTGATTGCGGGCAACATTCCAACTCCAATTCGATTATCATTGGCAATGTTCGTTCTCCAAAATTGCTAACATCATCAATGAAATGAGGTGTGGTGTTTGTAGCATCCATATGTATGTATTTGCAAACTAAGATAACAATTAGGCAAAATAAGCATAATAAATATAATTTTAAAATAACTTATAAGCTTATAAAAGATTAGGATTGCATATGAAAGCAAAAATACTTACAAAGAAAAAGAAAGGCTCAATGACTCAAATTACATATAAAAGCAAAAATAAATAAAAAACTCAAAACTAGAAGACTAGGGTTCAACTCCTCCAAATGAGACCTACAGAAGACCAAAGACCCGACAGAGCATCAATCCTTAAAATCAGTGTAGAATTTATTCAAGGGGTATTTACCAAAGGAAGTCACCAAACCGTCAAATGAGGTCTAAAATAGCATCACAATCCATCATTGTCTCAAATAAAAAACCTGCCAATATACTCCTCCCAAAACAAAGTGGAAAACAAAAGCTCCAGTTGGGGTCCAAGCAAGGAAAAATATAAAAAACAGATAAAAATTATTAATAGTGCATCATAGCCTCATCACTTCATAAGACAATTTACAAAAAGTATCATCATGAATGAAGTATCTCCAAAACTTATGAATGAAGTATATCTCTAATTAAAGATCAAGCCTTGCCTCTCTTATTAAGTAAAGTGCGCCTCCTTAAATGTAGATTATTTTAGCATACAAAATATGTTGTAGAGTTTTAACTCAGCACACAAATGTGCTTATGACCAATATCGTGCGATAGCACTTCCAAACACAAGCTACAAGTAATGATAATTAAATACCAAAGTAGGGTTTAATTATATCATCCACTCTTAATATAAAAATTAGCCTCTATGTGATGAGCCATTATTTCATTATAAAATGCTTATTTAATAGAACTCATCAAAAAATCAACACCCAGAAGAGCATACGACAATAGTTAAGAAAATTCGTAGAAAGATAATGTAAAATGCAGCATCTAATAGTATAAGAATAGTCAGTTGCAGAATTCATAACATCACTCTAATAACATCTAATTAAAGTTAAACATAAAATAATGTAAAGTACATCATACAACAACAGCATTAATGTTTTTGCAGCTTTTACCAATTTATGGGTTTTCCCCGCTTAGGTCTTAATAATTAATGTCAATAATAAAGAACAAAAATCAGTTTCATAAAATTAGTGCGATATGTATAGAAAAAATTCCTCCCTTCAGGCGTCGAAGAAAATAATCGTTCGTTCATAAATAAGAACGCCAAACATCGCACATCTATAATACAGAACCACAATGCTGCCAGAGGGAAAAAAAACAGCTGAGCCGAGAACGACCAACAGAGATGAAAGCAACCATTATCTACCAAAACAAAGTTCTTTTTTCTCGCTCAAAAAATTTTGCAAATGGATTTTAAAGGGGAGAAAGATCAAACCGTAAGACGCGGCCAATCATTCATGAGTCGTCAATCTAAGCTGCGGCGTACCTTAAGGACGAGACGTGAAGGATCGCTCGGTTAGCGTCGCCGCAAACCCTAGCAGGAGCAAAATGGGGAAAGGAAAAAAGGAAAGCTGGTCGGTGCGAATAGGTCTTCGGGCGACGCTAATCTTAGCAATGTTTAGGGACGAGAGGTGAATGATCGCTCGGACAAGAGGTGAAGGACACAAACGGGAAGAGGGGGAAAGGAAAGCTGCTCGTGCGCTTTTCGGGAGATCGGCTTGCCAAAAGAAAGCGGCTGGAGATTCGGGAGATTAGATTATCGTTGAGGGAGGGAGGGGTATAAGAAAAATGCTGACGTGGCCTGGCTTGCCACGTCAGAATCCATGTCATTCATATTTTTGTGAGTTATTAGGGTGTAGTGTAGCATTGTCCTAATAGAAATTGAAATCTTGAATTGTAAAATTCACAATTTCTCTTAATTTTAATAAATATAAATTAAAATGCTATATTTCTCACTTTAAAATATTATATATAGCTAGATGAATAGAATCTTATCAAAAATACTAACTCATTAATACTACGGTGACCCAAAGTTTTTTCAAGAAATCCTATGTTTGGTTCTATTCACTTAAATATGATCCTCGTATTTTTTATTTCTTACTCATACTATTTAATTAAAATATTATATTATTATTTCCATATATAAATATAAGATGAATTGAATCTTCTCAAAAATACAAACTCAGCCATACTATCTTGTTCCGAATTTCTCTCTTAATCGTAATTATCCAAATGACTTTGTAACTTAATATACATAATAAAATATAGATTATGTGATAATTCTATATATAAATATAACTTATATAGATATAAAAAAATTTTATTATTGATAATGAGAAA

Network for GWHGAAEX011870

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX011870
PKYSTHIITKITLFTSIATSDPKLCAKNKFYKFFFLKMFLTFLFNKNTTTPMAFDPQILVVFEQLYSVWLVALLQQNHFHNMMLMNDVPNSSLQTLCPEPKIKSENIRKILLQNVHLNTKGALPYLRVEENILCVIADKAEASSIMSTEATKSIYIAHKYKFGIYTLLCLKKKDLFLCIPKQIKTKRRIYLCVRIKIMTTQSGRCLKYLLIYTLLQPIYKSMPLVASRIAKRIARICKTTKKISHAVAFSTFDVLLGAGLTNLLVQTQLSSRLPPKEMIAWRWGFREQSVGRLMWGTSGLVAGRTLAACLLGAAATCYKYWKCRKWHCCTYRYLLCCQSASIHRTLSTLPLQKSSQHIFEVRLFNLAQLQPHPQNQSTICSVARRKTRSQQPASIKYSKQHKHICRRPYCEIETAKTVTIIHPYLGLTVKTKMPERSRAKLTPIHISTPYNFQLTKPSETKEDAVTRKGLVKESSDLLIYYIGYMAIQNPSLHFQEKITWLRQRRAPKDYEKLNRVPVKINIARLYKIKHASIPYLPGEENIQDMTIFNNSYTQPTISPMPKPTISPITSITKKIQNNHTMLYKAHNCTNAYTDNKIIFNSKSKQSKPLYEINAYHPVTCPRWSPQSSFYFRIAFHLSMSTQRYAKTVLIAFEHIKQIYTNVQSFLKLSNSSSVTNIKCVPSIHVTSKQQKAPVLRLVHVQLISSLFLSYLSMISNLFLSYLSIVLLKKLFGLIKINSKLCEGVIGMTNISNYSNSISILAKRKHFERLYKAENKNIRNSFTNEKYANKNKRNLKITAYASSSLFCHDDLVSWLAGVLLGVREQDLLLHLELHDHKNLSFLALVRQLMCMHEPHHLPQYNSHWHVVCFQHNSHPIYFCLFVSRIMSKLFIILSPSAYFVRNSGIPFLTQNTQYVTNSPAKLEAANAPHILFDEIINNSKIKSSHSIPHNYHIYFKRHIKLCIDNTVHQFLYFILEFVKYISICFRELFFINIDKLWLRNIFKISLSLFFELIFKHFHIAQQINVELSSNSRTHQRKHLRLHFVVTFQPRKNLSRIWEPSSPFSHKETTNFQAGIHHRQPTVFKLIPRQRVINNRKFRDRLFISTAFFQFLYDMPQTKTVLCRWKHLKNYIFYCSTLISYYSVMFIMHASHPLKQPKCFTCFITCTTERIEFSFTHKWCKGHVIPICEICGIKRHNIVKMIICHLTPRISPNSVDYHLSHQYCRKILSLILQSFKIFNSNYILINIQCFMLCHKISTILFNKIIIKSPTCKHCINRFIRNSNLIINYQLSLDNQRLTVASHKTNHLRLQIMIMLQENIINYTFGVTTINNKFYLATCCYYQFSTFCYFCCYMWLPLYNKTHNKFFAHKNYDLNVFCQNHYNTHKFCTIMLLQENISFQSQRFKKKIRFQIHDHFHSHNCLKSLNMHNNSMLCNNIIFCSNIIINMHNNPELLSTSNSFSDCGQHSNSNSIIIGNVRSPKLLTSSMKGVVFVASICMYLQTKITIRQNKHNKYNFKITYKLIKDDCIKQKYLQRKRKAQLKLHIKAKINKKLKTRRLGFNSSKDLQKTKDPTEHQSLKSVNLFKGYLPKEVTKPSNEVNSITIHHCLKKTCQYTPPKTKWKTKAPVGVQARKNIKNRKLLIVHHSLITSDNLQKVSSMKYLQNLMKYISNRSSLASLIKSAPPMIILAYKICCRVLTQHTNVLMTNIVRHFQTQATSNDNIPKGLIISSTLNIKISLYVMSHYFIIKCLFNRTHQKINTQKSIRQLRKFVERCKMQHLIVESVAEFITSLHLIKVKHKIMSTSYNNSINVFAAFTNLWVFPAVLIINVNNKEQKSVSNCDMYRKNSSLQASKKIIVRSIRTPNIAHLYRTTMLPEGKKTAEPRTTNRDESNHYLPKQSSFFSLKKFCKWILKGRKIKPDAANHSVVNLSCGVPGRDVKDRSVSVAANPSRSKMGKGKKESWSVRIGLRATLILAMFRDERMIARTRGEGHKREEGERKAARALFGRSACQKKAAGDSGDIIVEGGRGIRKMLTWPGLPRQNPCHSYFCELLGCSVALSKLKSIVKFTISLNFNKYKLKCYISHFKILYIARIESYQKYLINTTVTQSFFKKSYVWFYSLKYDPRIFYFLLILFNNIILLFPYINIRIESSQKYKLSHTILFRISLLIVIIQMTLLNIHNKIIMFYIILIIKNFIIDNEK

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.290
SRP064423	SRR2545915	Juvenile tuber	4.680
SRP108465	SRR5643513	five period of Gastrodia elata	4.040
	SRR5643514	five period of Gastrodia elata	5.300
	SRR5643515	five period of Gastrodia elata	5.260
	SRR5643524	five period of Gastrodia elata	5.400
	SRR5643525	five period of Gastrodia elata	4.690
	SRR5643528	five period of Gastrodia elata	3.170
	SRR5643658	five period of Gastrodia elata	4.390
	SRR5643659	five period of Gastrodia elata	5.470
	SRR5643660	five period of Gastrodia elata	6.830
	SRR5643661	five period of Gastrodia elata	3.980
	SRR5643662	five period of Gastrodia elata	3.860
	SRR5643663	five period of Gastrodia elata	7.240
	SRR5643664	five period of Gastrodia elata	4.840
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.920
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.150
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.800
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.110
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.740
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.370
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.230
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.830
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.830
SRP279888	Gastro	Gastrodia elata tuber	9.92
	Juven	Juvenile tuber	7.54
	Mother_Gastro	Mother tuber of Gastrodia elata	9.11
	Mother_Juven	Mother tuber of Juvenile	7.05