Detail information of GWHGAAEX011875/evm.TU.scaffold_4.196


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743836469|ref|XP_010936108.1|2.21E-61PREDICTED: uncharacterized protein LOC105055808 [Elaeis guineensis]
trEMBLtr|M0U681|M0U681_MUSAM7.00E-58Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP04190_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001137234943738645-
Transcript Sequence

Network for GWHGAAEX011875

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.190
SRR2545915Juvenile tuber31.380
SRP108465SRR5643513five period of Gastrodia elata29.390
SRR5643514five period of Gastrodia elata26.120
SRR5643515five period of Gastrodia elata24.940
SRR5643524five period of Gastrodia elata30.950
SRR5643525five period of Gastrodia elata34.190
SRR5643528five period of Gastrodia elata25.330
SRR5643658five period of Gastrodia elata30.570
SRR5643659five period of Gastrodia elata23.440
SRR5643660five period of Gastrodia elata24.690
SRR5643661five period of Gastrodia elata22.210
SRR5643662five period of Gastrodia elata23.150
SRR5643663five period of Gastrodia elata21.960
SRR5643664five period of Gastrodia elata17.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.560
SRR6049655Rhizomagastrodiae_C368-T10_good_130.880
SRR6049656Rhizomagastrodiae_C368-T07_good_117.170
SRR6049657Rhizomagastrodiae_C368-T07_good_118.220
SRR6049658Rhizomagastrodiae_C368-T04_good_118.580
SRR6049659Rhizomagastrodiae_C368-T04_good_116.280
SRR6049660Rhizomagastrodiae_C368-T01_good_116.240
SRR6049661Rhizomagastrodiae_C368-T04_good_114.090
SRR6049662Rhizomagastrodiae_C368-T01_good_119.030
SRR6049663Rhizomagastrodiae_C368-T01_good_118.750
SRR6049664Rhizomagastrodiae_C368-T10_good_121.500
SRR6049665Rhizomagastrodiae_C368-T10_good_121.500
SRP279888GastroGastrodia elata tuber 20.20
JuvenJuvenile tuber21.86
Mother_GastroMother tuber of Gastrodia elata 20.97
Mother_JuvenMother tuber of Juvenile 15.83