Gene detail

Detail information of GWHGAAEX011881/evm.TU.scaffold_4.203

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG3332	1.00E-34	N-acetylglucosaminyl phosphatidylinositol de-N-acetylase
nr	gi\|743852502\|ref\|XP_010940401.1\|	3.40E-83	PREDICTED: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like isoform X2 [Elaeis guineensis]
trEMBL	tr\|B9SN63\|B9SN63_RICCO	3.00E-80	N-acetylglucosaminyl-phosphatidylinositol de-n-acetylase, putative {ECO:0000313\|EMBL:EEF34924.1}
TAIR	AT2G27340	1.00E-34	N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	3905150	3920817	+

Transcript Sequence
>GWHTAAEX011881 GTAAGGCTCATACTTATGTTATTATTATAGTAACATGCTATCAATTATGGGTTATGTTCCATTGGAAAACTATTTTGTACTCTGTTGTTACTTTGTCTTCTCAATAGCAGAAACCCAATATTGTCTACTCATTAATTTAAATTTTCTCGATTTTTGCTTTGTTATATCTCACATTACTTCACTATAAACTTTTTATTGATTTTATCTTTATTGCAATATTCTTGAACAGCTCTCTTTTTTTTCTTTCTTACATATCTTGGCAATAATTTACTTCTCCAAATGTGACATCTGCTGAATCTAGTAATGTTATTGTTTAGATACTTCCAATCTTTTACAACTTTATCTTATTTAAGTTTAAAGATTGATCATTGTACATTGCCTTTTGTAAAGATAATTTTTCTTTGGTTGATAAATCATTGCTATAAAATTTATTTTGTTTATTATACCTCTATATTATTAATCCTTAAATCATAATTTTCACAATTCTTTAATTCACTCATGATAATTATCTACACTCCAAACATACCTAATTTGATTATTCACTTGCGTTGGCTATGATATACACTCTTTAATCCACTTGTAATAATATAATGTTCACCTAATTTTACAAATCATTAGAGGCTTATATAGTTCATTTTTAATCCTTGTTAAGGCTTGCTTAAGTTTCAAACTGCCTTTTAAGATAAGACAATCTAAATTTGAATACAATAACTTTGTGATAGGTCAGCTTTGGCCAACTTAAGCTACAAGCACCTCAAGCTTCACTCAACTATAGCTTTCAAATAATCAAATTTCAATGTATGCATGCTTAAACTAACATAAATTATCTTAACAATCAACTAATATTTACTTTATTAATTTAAATTGGCTTAACTATCTAGCTTAAGATGCGATAAATTTAAATTAAGTAGCCCATAAAATTTTGTATCACTTGCTTAGCTTAATAACTTCTACATGTTTTTAAGGTTTTACCATTTTATTGTAGTAAATAATTTTTTTTGTGCTCATTCACTTCAACAAGCTTTCTTTTTTACCATGTAATATAGTTGATTATTGCAATAGGTGTGAGTGGTAGTTGTGAGTCAATGGCTAGCCAACACTTGAGGTTTAAAAAAATTAGGAAATTTAAAAGACTGCATTCTATTAAGTTCAATAATGTAATGACCCTAATTCATTAATAAGGCAAACATTGAATTCCCGATTCGTTGAATCTTCCAGCAAATTTTAGTTTCCCGTTAAAATTCCAGTTAAATTTCGATTTTTCAGTTTCAAACCTTCCATTGGATCGTTTTAAAGTTCGTTTAAAGCTGAAATTTGAAATTTAAAACCGTCATTAACGCATAATTAAGTTAGCAAAACATAACTTTCTCATTTTAGACTCTTATTAAAGGAAAATAAAATTGGTCGAAACTGAAAAATAATTGAATTATCGTTGTTTTAGGAAGAAATGTTTAAGAGAATTAAGAATATACCCACTGTTTTAAGAAGATTAAATAGGAGTATAATATTGAGCCGAATAAATCGGACGGGCCTTGGGTACGCACGTCCAATTTATTTATTCGGAGAAACACCGAAGACCCTCTGCTCTCAGTCGCTCGGTTATCACCCGACGAGACCCTCCTTCCGCTCGAGCATACCTGGCAACCAATCGAGCAGAAAAGATCGATCCTCCTTCCGCTCGTGCGCTGAGAGACGAGTAGCGTGCGGCTGACCCGCTCGACTTCTCCTTCCACCCAGATTTTTCTCCGCTCAATCTCTCGCAGCGCCGATTCCCCTCTACTAGGGCACCTGCCTCTGCGCCGAACCCTCTCCGCTCGGTTCCACGCCCGATCCTTGCCGCTCGGCCCTTTGCGTCGACTCTCCTCTGCGTGTCGCTCGACTCTCTCGCTCGGCTTAAGCCTTAACGGAGGGAAAGAAAGGAGGATGGAGCACTGGTTCTTGTTCTCCTTGTTAGCTGTCGTAATATGGCTGGTTTCTTTATGGAGGATTTTATCTTCATCCGCGCAACCAAATTGCTCGTTCATCTCTAATTCGACCCGAATTAGAAGCCGCAGAAGGAAAAGTAACGTTTTGCTTGTGGTGGCTCATCAAGATGATGAGTCCATGTAATGCGGATGGCAAAGGAAATATACGTGAAGAAGAACTTTACAGGGCATGTGCAATACTTAAGATTCCACTTCAGCAAATTAAAATAATTGATCATCCGGATTTGCAGGATGGGTTTGACAAGCCGTGGAAACACAAATTATTGGCAACTTTTATTGAAAAAGAGATAATAAGGCAGAGTATTGATGTGTTAATTACATTTGATAACCATGGAGTGTCAAACCATCCAAATCATTGTGATGTTCACTATGGAATTAGTTTTCTTCTACATGAACATGCAGACTTAAATATTGAAGTCTGGGAATTGATCAGCACAGGTATCATTCGCAAATATATTGGACCTGTGGATGTATGGATTTCATTACTGACTTCGTTATCTGATAAGAGTGGAAGAAGCATTTGTTGTGTACCGAATCAATATCCTCAGAGAAGCTATCAGGCGATGGCTGAACATTATAGCCAGTGGGTGTGGTATCGGAAGATGTTTGTGCTGTTTTCTAGATACACATACATCAACACGCTCAGAAGGATCACTGCCTAA

Network for GWHGAAEX011881

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02585.16	PIG-L	8	89	7.50E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K03434	PIGL	Metabolic pathways	map01100
K03434	PIGL	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	map00563

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.150
SRP064423	SRR2545915	Juvenile tuber	8.710
SRP108465	SRR5643513	five period of Gastrodia elata	11.780
	SRR5643514	five period of Gastrodia elata	13.650
	SRR5643515	five period of Gastrodia elata	11.740
	SRR5643524	five period of Gastrodia elata	13.160
	SRR5643525	five period of Gastrodia elata	8.800
	SRR5643528	five period of Gastrodia elata	7.740
	SRR5643658	five period of Gastrodia elata	14.060
	SRR5643659	five period of Gastrodia elata	9.140
	SRR5643660	five period of Gastrodia elata	11.290
	SRR5643661	five period of Gastrodia elata	3.990
	SRR5643662	five period of Gastrodia elata	9.330
	SRR5643663	five period of Gastrodia elata	10.670
	SRR5643664	five period of Gastrodia elata	11.650
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.660
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.820
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.030
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.800
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.720
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.960
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.000
SRP279888	Gastro	Gastrodia elata tuber	16.70
	Juven	Juvenile tuber	27.71
	Mother_Gastro	Mother tuber of Gastrodia elata	21.94
	Mother_Juven	Mother tuber of Juvenile	28.35