Detail information of GWHGAAEX011886/evm.TU.scaffold_4.208


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|268315664|ref|YP_003289383.1|6.00E-146voltage-dependent potassium channel subunit beta [Rhodothermus marinus DSM 4252]
KOGKOG15750Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
nrgi|643701020|gb|KDP20334.1|0hypothetical protein JCGZ_06420 [Jatropha curcas]
Swissprottr|O23016|KCAB_ARATH0Probable voltage-gated potassium channel subunit beta
trEMBLtr|A0A067JLF6|A0A067JLF6_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP20334.1}
TAIRAT1G046900potassium channel beta subunit 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001140768074078552+
Transcript Sequence

Network for GWHGAAEX011886

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00248.20Aldo_ket_red163171.10E-68
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.120
SRR5643514five period of Gastrodia elata0.140
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.100
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.110
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.040
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.220
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.300
SRR6049660Rhizomagastrodiae_C368-T01_good_10.090
SRR6049661Rhizomagastrodiae_C368-T04_good_10.110
SRR6049662Rhizomagastrodiae_C368-T01_good_10.120
SRR6049663Rhizomagastrodiae_C368-T01_good_10.040
SRR6049664Rhizomagastrodiae_C368-T10_good_10.440
SRR6049665Rhizomagastrodiae_C368-T10_good_10.440
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber1.54
Mother_GastroMother tuber of Gastrodia elata 0.12
Mother_JuvenMother tuber of Juvenile 0.71