Detail information of GWHGAAEX011887/evm.TU.scaffold_4.209


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|268315664|ref|YP_003289383.1|4.00E-145voltage-dependent potassium channel subunit beta [Rhodothermus marinus DSM 4252]
KOGKOG15750Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
nrgi|643701020|gb|KDP20334.1|0hypothetical protein JCGZ_06420 [Jatropha curcas]
Swissprottr|O23016|KCAB_ARATH0Probable voltage-gated potassium channel subunit beta
trEMBLtr|A0A067JLF6|A0A067JLF6_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP20334.1}
TAIRAT1G046900potassium channel beta subunit 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001140856424086990+
Transcript Sequence

Network for GWHGAAEX011887

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00248.20Aldo_ket_red163173.10E-70
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.740
SRR2545915Juvenile tuber5.940
SRP108465SRR5643513five period of Gastrodia elata126.200
SRR5643514five period of Gastrodia elata76.060
SRR5643515five period of Gastrodia elata40.270
SRR5643524five period of Gastrodia elata73.020
SRR5643525five period of Gastrodia elata1.360
SRR5643528five period of Gastrodia elata8.060
SRR5643658five period of Gastrodia elata2.160
SRR5643659five period of Gastrodia elata6.500
SRR5643660five period of Gastrodia elata18.180
SRR5643661five period of Gastrodia elata2.400
SRR5643662five period of Gastrodia elata2.940
SRR5643663five period of Gastrodia elata2.120
SRR5643664five period of Gastrodia elata2.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_158.410
SRR6049655Rhizomagastrodiae_C368-T10_good_153.610
SRR6049656Rhizomagastrodiae_C368-T07_good_1120.810
SRR6049657Rhizomagastrodiae_C368-T07_good_160.970
SRR6049658Rhizomagastrodiae_C368-T04_good_175.470
SRR6049659Rhizomagastrodiae_C368-T04_good_162.340
SRR6049660Rhizomagastrodiae_C368-T01_good_189.240
SRR6049661Rhizomagastrodiae_C368-T04_good_1102.670
SRR6049662Rhizomagastrodiae_C368-T01_good_186.610
SRR6049663Rhizomagastrodiae_C368-T01_good_185.250
SRR6049664Rhizomagastrodiae_C368-T10_good_172.060
SRR6049665Rhizomagastrodiae_C368-T10_good_172.060
SRP279888GastroGastrodia elata tuber 9.79
JuvenJuvenile tuber92.51
Mother_GastroMother tuber of Gastrodia elata 73.38
Mother_JuvenMother tuber of Juvenile 142.60