Detail information of GWHGAAEX011905/evm.TU.scaffold_4.227


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|20093661|ref|NP_613508.1|2.00E-1150S ribosomal protein L37 [Methanopyrus kandleri AV19]
KOGKOG34751.00E-5060S ribosomal protein L37
nrgi|115443751|ref|NP_001045655.1|7.45E-56Os02g0111700 [Oryza sativa Japonica Group]
Swissprottr|Q8LEM8|RL373_ARATH2.00E-5160S ribosomal protein L37-3
trEMBLtr|A2X009|A2X009_ORYSI3.00E-56Ribosomal protein L37 {ECO:0000256|RuleBase:RU000576}
TAIRAT1G152501.00E-50Zinc-binding ribosomal protein family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001143600594363389-
Transcript Sequence

Network for GWHGAAEX011905

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01907.18Ribosomal_L37e47973.50E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02922RP-L37e, RPL37 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms64.390
SRR2545915Juvenile tuber100.790
SRP108465SRR5643513five period of Gastrodia elata319.320
SRR5643514five period of Gastrodia elata398.880
SRR5643515five period of Gastrodia elata321.490
SRR5643524five period of Gastrodia elata387.350
SRR5643525five period of Gastrodia elata173.930
SRR5643528five period of Gastrodia elata196.390
SRR5643658five period of Gastrodia elata148.550
SRR5643659five period of Gastrodia elata268.700
SRR5643660five period of Gastrodia elata254.900
SRR5643661five period of Gastrodia elata316.660
SRR5643662five period of Gastrodia elata244.880
SRR5643663five period of Gastrodia elata239.130
SRR5643664five period of Gastrodia elata222.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1248.750
SRR6049655Rhizomagastrodiae_C368-T10_good_1342.780
SRR6049656Rhizomagastrodiae_C368-T07_good_1352.510
SRR6049657Rhizomagastrodiae_C368-T07_good_1207.450
SRR6049658Rhizomagastrodiae_C368-T04_good_1209.650
SRR6049659Rhizomagastrodiae_C368-T04_good_1127.580
SRR6049660Rhizomagastrodiae_C368-T01_good_1232.420
SRR6049661Rhizomagastrodiae_C368-T04_good_1233.820
SRR6049662Rhizomagastrodiae_C368-T01_good_1412.790
SRR6049663Rhizomagastrodiae_C368-T01_good_1320.870
SRR6049664Rhizomagastrodiae_C368-T10_good_1486.770
SRR6049665Rhizomagastrodiae_C368-T10_good_1486.770
SRP279888GastroGastrodia elata tuber 256.98
JuvenJuvenile tuber137.81
Mother_GastroMother tuber of Gastrodia elata 161.85
Mother_JuvenMother tuber of Juvenile 83.27