Detail information of GWHGAAEX011906/evm.TU.scaffold_4.228


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695027306|ref|XP_009400991.1|5.41E-44PREDICTED: protein SCAF8-like [Musa acuminata subsp. malaccensis]
Swissprottr|O50055|COL1_ARATH7.00E-10Zinc finger protein CONSTANS-LIKE 1
trEMBLtr|M0SYV0|M0SYV0_MUSAM6.00E-45Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P15710_001}
TAIRAT2G333502.00E-28CCT motif family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001144154214418696+
Transcript Sequence

Network for GWHGAAEX011906

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06203.13CCT2833255.10E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.050
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.090
SRR6049657Rhizomagastrodiae_C368-T07_good_10.080
SRR6049658Rhizomagastrodiae_C368-T04_good_10.050
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.490
SRR6049662Rhizomagastrodiae_C368-T01_good_10.040
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00