Gene detail

Detail information of GWHGAAEX011915/evm.TU.scaffold_4.238

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672123928\|ref\|XP_008785335.1\|	PREDICTED: uncharacterized protein LOC103703999 [Phoenix dactylifera]
trEMBL	tr\|A0A0A0L4B2\|A0A0A0L4B2_CUCSA	Uncharacterized protein {ECO:0000313\|EMBL:KGN56825.1}
TAIR	AT2G33420	Protein of unknown function (DUF810)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	4885033	4889555	-

Transcript Sequence
>GWHTAAEX011915 ATGGCGCACCACCACCCCTCGGGCTCCTCCTTCTCGGACTTTACCCCTTCCGGCGCGCACGACTCCGACGCTGGAGGCGGCGGCGGCGGCGACGGCGCAGACCCGGAATGGCCCTTCGGCCGCATAGACTCCCTCGACCGCGACGAGCTGCGGGAGTGCGCCTACGAGCTCTTCTTCGCGTGCTGCCGCTCCTCGCCTGGCTTCGGCGGAAGAAACCCCCCGGCGTTCTACCCGTCGGCGGAGGCGCAGAACGCCACCTCCGGGGTGGGGATGACGGTCGCCGGCAGCAGAATCAAGCGCGCGCTCGGCCTGCGCACTCGCCGCAGCTCACCGCCGATGCGCGCGATGAGCTCCCATTCCTCGTCTCTCGCCTGCATTGCGGGCGCGGCCTCCCCCGGCCCTGGCCGCCTGAAACAGCGCCCCATGACCTCCGCTGAGATCATGCGCCAGCAGATGGGAGTCCCCGAACATAGCGACAACCGCCTCCGCAAAACCATCATGCGCACCCTCGTCGGCCAGGGGGGGAAGAGAACGGAGAGCATAATCCTGCCGCTGGAGCTTCTGCGGCAGCTGAAGCCATCAGAGTTCAGCGACGCGCAGGAGTACCACAAATGGCAGCGGCGGCAGCTGAGGATTCTAGAGGCGGGTCTGCTTCTGCATCCGTCAGTCCCGCTGGACCGGCTGAACGAGTCAGCGCTGCACCTGCAGGAACTAGTCCGTTCGGCCGAGCAGAAGCCCATGGACGTCAGCAGAAACTCGGAGGCCCTCCGGTCTCTCTGCAGCGCGGTGGTCTCGCTGGCATGGCGGGGCCCGGACGGGGCCCAGGCGGAGGCCAGCCATTGGGCGGACGGTTTCCCGCTGAATATCCACCTCTACCACTGCCTGCTGCGATCCGTCTTCGACGTAAGGGACGAGACGGCGGTGCTGGAGGAGGTGGACGAGATGGTGGAGCTGATGAAGAGGACGTGGGCCACGCTGGGGGTCAACAAGGCGGCGCATTGCCTGTGCCTGTCCTGGGTGCTGTTCGAGCAGTACGTGAGAACGGGACAGATAGAGGCCGACCTGCTGGGAGCTACACTGGCCGCGCTCGGCGACGTTGCCGCCGAAGCCAGGAACAGCGACCCGATGTTCCTCAGGCTCCTCTCCCCCGCGATGACGTCCATGCTCGCGTGGGCCGACAGGAAGCTGCTTGATTACCACGCCACGTTCCGCGGGAAATGCTCCGTCGGCCTCATGGAAAAGGTGCTCGCCCTCGCCCTCACCGCCGCCAGCATCCTCCACGGGCATAAGGACGGCGCCCGCGGCGCGGGCGCCTACTCTCCCGCGTCCTATGTTGAGCGGTGCATCAAGTCCTCTCTCAAGAGCGCCTTCACCAAGATTCTGGAGAACGGGAACGGGAATGTAGACAGCATGGTGGTGGAGGTGGACGAGGAGCCGAGCGAGACGCTGGTGCATCTGGCCGGCGACACGGAGAGCCTTTTGACGTTGGAGAAGGAGACGTACGGGCCCGTGCTGAGAAGGTGGCATCCGGGATCGACAGCTGTGGCTGTGGCAACGCTTCACAGCTGCTACGGGATCGTGCTGAAGCAGTACTTGGCGAGGATCACAGGGCTGAACAATGAGTCGGTGAGAGTGCTGCAGACCGCGGGAAAGCTTGAGAAGGCTCTGGCTCAGATGGTCGTCGACGATTCCGTCCACTGGGATGATGGAGGGAAGGCTATCGTCAACGAGATGATCCCCTACGACGTCGACTCCGTTGTCCTTACTCTCATGAAGAATTGGATAACGGCGAGGTTGAGAATCGCGAGGGAGTGTTTCAACAGAGGAAAGGAAACAGAGACGTGGAACCCAAACCCGAAATCAGAGCCGTACGCGCAGTCGGCGATGGATCTGATGAAGCTGGCGAAGGTGACAGTGGACGAGTTCTTCGAGATGCAGGTGGCCGCAAGGGAGGAGCTGGTTCAGGAACTCGCCGACGGCCTCGAATCCCTCTTCCAGGACTACGCCTCCTTCGTCGCCAGCTCCTCCGGCACGAAGCAGGGGTGCATCCCGACGCTCCCTCCCCTGACCCGATGCAATCAGGACTCTGGCCTGGCGAGGCTGTGGAAGAGAGCGCGGTCGCTGGTGGGGCTGCCGCCGTCGTCCTCCGCCGGCCATCCCAAGGGCAGAAAGAAAGCCGACGCGGCGGAAGGCGACGCCCCGCGGCCGTCCATTAGCCGGGCGACCCAACGCGTGTACTTCCGGCTCAACACCCTGCACTACGTTATGGCCGCCCTCCACTCCATCGACAAGTCCCTCTCCTTCTTCGGCCGGACCCCGTCGCGCTCCCCCCGGCCCGGCTCGGCCTCCCGCCGCCGAATCGCCCCGACCAGGTTCGACTTGGCCCGGTCCTCGCTGCACTCGGCCGCCGCCCACGTGTCGGAAGTGGCCGCCTTCCGCCTCATCTTTACGGACTCCCGCCAAGCCTTCTACGGGGGGCTGTACGTTGGGGGCGTGGCGGGCGCGCGCATCCGGCCGTCGCTTCGGCTGCTGAAGCAGAACCTGAACCTGATCCTGGCCATCCTGACGGACCGGGCCCAGGCCGGGGCGGTCCGGGAGGTGCTGAGGGCGGCAGTGGAGGCCTTTCTGATGGTGCTGCTGGCCGGCGGTGGTGAGCGGGCTTTCTCGAGGGCAGACAGCGCCATGCTGGCAGACGACCTGGAGAGTCTTAGAAGGCTCTTCTGCACGTCCGGCGAGGGCCTTGTGGCCGAGGCCGTTGTCGAGAGGGAGGCCGAAGCTGCCGACGGGATCGTCGCCCTCATGGCCCTCCCCACCGAGAAACTCATCGAGGAGTTCGCCGCCTCCACGTGTCAGGCCAGCGGCATTGGCGGGGCCCAGAAGCTTCCCATGCCGCCCACCACCGCCAGGTGGCACCCATCGGACCCCAACACCATTCTCCGGGTCATTTCTTACCGGGATGACGAACTTGCCAGCCGCTTCTTGAAGAAGACCTTTCAGATGCCCAAGAGGAAGTGAACCAATCTTCTCTATCCATCCTTCATTCATTTGTACAAGCTTCCTTCCTATCATCTCTTTTGCGCTTCTCAAACAAAGAC

Network for GWHGAAEX011915

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05664.10	DUF810	45	764	7.50E-250

Protein Sequence

>GWHPAAEX011915
MAHHHPSGSSFSDFTPSGAHDSDAGGGGGGDGADPEWPFGRIDSLDRDELRECAYELFFACCRSSPGFGGRNPPAFYPSAEAQNATSGVGMTVAGSRIKRALGLRTRRSSPPMRAMSSHSSSLACIAGAASPGPGRLKQRPMTSAEIMRQQMGVPEHSDNRLRKTIMRTLVGQGGKRTESIILPLELLRQLKPSEFSDAQEYHKWQRRQLRILEAGLLLHPSVPLDRLNESALHLQELVRSAEQKPMDVSRNSEALRSLCSAVVSLAWRGPDGAQAEASHWADGFPLNIHLYHCLLRSVFDVRDETAVLEEVDEMVELMKRTWATLGVNKAAHCLCLSWVLFEQYVRTGQIEADLLGATLAALGDVAAEARNSDPMFLRLLSPAMTSMLAWADRKLLDYHATFRGKCSVGLMEKVLALALTAASILHGHKDGARGAGAYSPASYVERCIKSSLKSAFTKILENGNGNVDSMVVEVDEEPSETLVHLAGDTESLLTLEKETYGPVLRRWHPGSTAVAVATLHSCYGIVLKQYLARITGLNNESVRVLQTAGKLEKALAQMVVDDSVHWDDGGKAIVNEMIPYDVDSVVLTLMKNWITARLRIARECFNRGKETETWNPNPKSEPYAQSAMDLMKLAKVTVDEFFEMQVAAREELVQELADGLESLFQDYASFVASSSGTKQGCIPTLPPLTRCNQDSGLARLWKRARSLVGLPPSSSAGHPKGRKKADAAEGDAPRPSISRATQRVYFRLNTLHYVMAALHSIDKSLSFFGRTPSRSPRPGSASRRRIAPTRFDLARSSLHSAAAHVSEVAAFRLIFTDSRQAFYGGLYVGGVAGARIRPSLRLLKQNLNLILAILTDRAQAGAVREVLRAAVEAFLMVLLAGGGERAFSRADSAMLADDLESLRRLFCTSGEGLVAEAVVEREAEAADGIVALMALPTEKLIEEFAASTCQASGIGGAQKLPMPPTTARWHPSDPNTILRVISYRDDELASRFLKKTFQMPKRK

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.020
SRP064423	SRR2545915	Juvenile tuber	0.480
SRP108465	SRR5643513	five period of Gastrodia elata	0.680
	SRR5643514	five period of Gastrodia elata	0.490
	SRR5643515	five period of Gastrodia elata	0.640
	SRR5643524	five period of Gastrodia elata	0.550
	SRR5643525	five period of Gastrodia elata	0.070
	SRR5643528	five period of Gastrodia elata	0.100
	SRR5643658	five period of Gastrodia elata	0.020
	SRR5643659	five period of Gastrodia elata	0.400
	SRR5643660	five period of Gastrodia elata	0.240
	SRR5643661	five period of Gastrodia elata	0.380
	SRR5643662	five period of Gastrodia elata	0.090
	SRR5643663	five period of Gastrodia elata	0.130
	SRR5643664	five period of Gastrodia elata	0.080
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.180
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.820
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.940
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.520
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.870
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.280
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.120
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.500
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.500
SRP279888	Gastro	Gastrodia elata tuber	0.22
	Juven	Juvenile tuber	0.61
	Mother_Gastro	Mother tuber of Gastrodia elata	0.67
	Mother_Juven	Mother tuber of Juvenile	0.56