Detail information of GWHGAAEX011921/evm.TU.scaffold_4.244
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383787019|ref|YP_005471588.1| | 5.00E-45 | adenylate kinase family protein [Fervidobacterium pennivorans DSM 9078] |
| KOG | KOG3078 | 2.00E-137 | Adenylate kinase |
| nr | gi|719992084|ref|XP_010253459.1| | 5.88E-149 | PREDICTED: probable adenylate kinase 1, chloroplastic [Nelumbo nucifera] |
| Swissprot | tr|Q9ZUU1|KAD1_ARATH | 5.00E-138 | Adenylate kinase 1, chloroplastic (Precursor) |
| trEMBL | tr|A0A061FN26|A0A061FN26_THECC | 3.00E-143 | Adenosine kinase {ECO:0000313|EMBL:EOY18486.1} |
| TAIR | AT2G37250 | 2.00E-137 | adenosine kinase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 5053555 | 5075244 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011921
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00406.21 | ADK | 64 | 256 | 5.50E-38 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00939 | adk, AK | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Biosynthesis of antibiotics | map01130 | ||
| Purine metabolism | map00230 | ||
| Thiamine metabolism | map00730 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006139 | Biological Process | nucleobase-containing compound metabolic process |
| GO:0004017 | Molecular Function | adenylate kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0019205 | Molecular Function | nucleobase-containing compound kinase activity |
| GO:0016776 | Molecular Function | phosphotransferase activity, phosphate group as acceptor |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 21.930 |
| SRR2545915 | Juvenile tuber | 24.940 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 26.450 |
| SRR5643514 | five period of Gastrodia elata | 31.680 | |
| SRR5643515 | five period of Gastrodia elata | 25.840 | |
| SRR5643524 | five period of Gastrodia elata | 29.240 | |
| SRR5643525 | five period of Gastrodia elata | 30.450 | |
| SRR5643528 | five period of Gastrodia elata | 33.870 | |
| SRR5643658 | five period of Gastrodia elata | 31.380 | |
| SRR5643659 | five period of Gastrodia elata | 34.740 | |
| SRR5643660 | five period of Gastrodia elata | 32.250 | |
| SRR5643661 | five period of Gastrodia elata | 31.970 | |
| SRR5643662 | five period of Gastrodia elata | 32.720 | |
| SRR5643663 | five period of Gastrodia elata | 30.030 | |
| SRR5643664 | five period of Gastrodia elata | 26.910 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 28.500 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.480 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 24.470 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.100 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.980 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 23.080 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 20.140 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 42.130 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 37.220 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 40.330 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 40.330 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.13 |
| Juven | Juvenile tuber | 32.75 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 29.10 | |
| Mother_Juven | Mother tuber of Juvenile | 23.13 |