Detail information of GWHGAAEX011923/evm.TU.scaffold_4.246


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27340Uncharacterized conserved protein
nrgi|672113871|ref|XP_008812998.1|0PREDICTED: beta-catenin-like protein 1 [Phoenix dactylifera]
trEMBLtr|B9SJM0|B9SJM0_RICCO0Putative uncharacterized protein {ECO:0000313|EMBL:EEF36193.1}
TAIRAT3G027100ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001150868865105528+
Transcript Sequence

Network for GWHGAAEX011923

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08216.10CTNNBL381382.50E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12864CTNNBL1 Spliceosome map03040

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.850
SRR2545915Juvenile tuber26.470
SRP108465SRR5643513five period of Gastrodia elata27.660
SRR5643514five period of Gastrodia elata29.440
SRR5643515five period of Gastrodia elata28.740
SRR5643524five period of Gastrodia elata31.490
SRR5643525five period of Gastrodia elata31.200
SRR5643528five period of Gastrodia elata26.420
SRR5643658five period of Gastrodia elata29.400
SRR5643659five period of Gastrodia elata31.610
SRR5643660five period of Gastrodia elata31.170
SRR5643661five period of Gastrodia elata31.060
SRR5643662five period of Gastrodia elata29.370
SRR5643663five period of Gastrodia elata30.060
SRR5643664five period of Gastrodia elata29.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.310
SRR6049655Rhizomagastrodiae_C368-T10_good_119.810
SRR6049656Rhizomagastrodiae_C368-T07_good_130.350
SRR6049657Rhizomagastrodiae_C368-T07_good_126.680
SRR6049658Rhizomagastrodiae_C368-T04_good_128.520
SRR6049659Rhizomagastrodiae_C368-T04_good_128.010
SRR6049660Rhizomagastrodiae_C368-T01_good_127.980
SRR6049661Rhizomagastrodiae_C368-T04_good_127.860
SRR6049662Rhizomagastrodiae_C368-T01_good_133.590
SRR6049663Rhizomagastrodiae_C368-T01_good_130.420
SRR6049664Rhizomagastrodiae_C368-T10_good_132.890
SRR6049665Rhizomagastrodiae_C368-T10_good_132.890
SRP279888GastroGastrodia elata tuber 43.84
JuvenJuvenile tuber44.67
Mother_GastroMother tuber of Gastrodia elata 36.67
Mother_JuvenMother tuber of Juvenile 39.08