Detail information of GWHGAAEX011927/evm.TU.scaffold_4.250
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|377809771|ref|YP_005004992.1| | 3.00E-15 | phosphotransferase enzyme family protein [Pediococcus claussenii ATCC BAA-344] |
| nr | gi|743852040|ref|XP_010940293.1| | 5.03E-87 | PREDICTED: inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 [Elaeis guineensis] |
| Swissprot | tr|Q84MA9|Y1063_ARATH | 1.00E-69 | Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 (Precursor) |
| trEMBL | tr|M1CJI6|M1CJI6_SOLTU | 6.00E-80 | Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400068806} |
| TAIR | AT1G10850 | 7.00E-70 | Leucine-rich repeat protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 5151147 | 5172923 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011927
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 29 | 212 | 1.50E-19 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-III |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.230 |
| SRR2545915 | Juvenile tuber | 0.770 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.550 |
| SRR5643514 | five period of Gastrodia elata | 2.480 | |
| SRR5643515 | five period of Gastrodia elata | 3.530 | |
| SRR5643524 | five period of Gastrodia elata | 1.410 | |
| SRR5643525 | five period of Gastrodia elata | 0.620 | |
| SRR5643528 | five period of Gastrodia elata | 0.370 | |
| SRR5643658 | five period of Gastrodia elata | 1.490 | |
| SRR5643659 | five period of Gastrodia elata | 2.780 | |
| SRR5643660 | five period of Gastrodia elata | 2.500 | |
| SRR5643661 | five period of Gastrodia elata | 3.090 | |
| SRR5643662 | five period of Gastrodia elata | 4.600 | |
| SRR5643663 | five period of Gastrodia elata | 2.910 | |
| SRR5643664 | five period of Gastrodia elata | 4.850 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.400 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.260 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.980 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.610 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.480 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.780 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.300 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.330 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.880 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.800 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 4.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 4.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.14 |
| Juven | Juvenile tuber | 0.70 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.90 | |
| Mother_Juven | Mother tuber of Juvenile | 1.31 |