Detail information of GWHGAAEX011931/evm.TU.scaffold_4.255


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218961413|ref|YP_001741188.1|2.00E-39preprotein translocase secY subunit, essential membrane protein [Candidatus Cloacimonas acidaminovorans str. Evry]
nrgi|672185360|ref|XP_008812800.1|0PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Phoenix dactylifera]
Swissprottr|F4IQV7|SCY2_ARATH0Preprotein translocase subunit SCY2, chloroplastic (Precursor)
trEMBLtr|M0SCK4|M0SCK4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P07370_001}
TAIRAT2G315302.00E-178SecY protein transport family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001152263205227405-
Transcript Sequence

Network for GWHGAAEX011931

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00344.19SecY13311.00E-55
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.880
SRR2545915Juvenile tuber14.650
SRP108465SRR5643513five period of Gastrodia elata5.350
SRR5643514five period of Gastrodia elata5.100
SRR5643515five period of Gastrodia elata5.440
SRR5643524five period of Gastrodia elata4.820
SRR5643525five period of Gastrodia elata9.090
SRR5643528five period of Gastrodia elata5.650
SRR5643658five period of Gastrodia elata6.730
SRR5643659five period of Gastrodia elata7.150
SRR5643660five period of Gastrodia elata9.310
SRR5643661five period of Gastrodia elata7.120
SRR5643662five period of Gastrodia elata9.840
SRR5643663five period of Gastrodia elata9.500
SRR5643664five period of Gastrodia elata8.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.670
SRR6049655Rhizomagastrodiae_C368-T10_good_14.280
SRR6049656Rhizomagastrodiae_C368-T07_good_19.550
SRR6049657Rhizomagastrodiae_C368-T07_good_114.620
SRR6049658Rhizomagastrodiae_C368-T04_good_111.860
SRR6049659Rhizomagastrodiae_C368-T04_good_117.820
SRR6049660Rhizomagastrodiae_C368-T01_good_110.530
SRR6049661Rhizomagastrodiae_C368-T04_good_112.870
SRR6049662Rhizomagastrodiae_C368-T01_good_18.530
SRR6049663Rhizomagastrodiae_C368-T01_good_17.470
SRR6049664Rhizomagastrodiae_C368-T10_good_17.540
SRR6049665Rhizomagastrodiae_C368-T10_good_17.540
SRP279888GastroGastrodia elata tuber 8.74
JuvenJuvenile tuber15.15
Mother_GastroMother tuber of Gastrodia elata 6.06
Mother_JuvenMother tuber of Juvenile 10.38