Detail information of GWHGAAEX011932/evm.TU.scaffold_4.256


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719963703|ref|XP_010250493.1|3.42E-170PREDICTED: tobamovirus multiplication protein 3 isoform X1 [Nelumbo nucifera]
Swissprottr|Q9ZUM2|TOM3_ARATH1.00E-164Tobamovirus multiplication protein 3
trEMBLtr|M0TQ68|M0TQ68_MUSAM2.00E-169Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P13650_001}
TAIRAT1G145305.00E-152Protein of unknown function (DUF1084)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001152298355257587+
Transcript Sequence

Network for GWHGAAEX011932

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06454.10DUF1084162874.90E-142
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.290
SRR2545915Juvenile tuber19.010
SRP108465SRR5643513five period of Gastrodia elata21.070
SRR5643514five period of Gastrodia elata27.860
SRR5643515five period of Gastrodia elata27.050
SRR5643524five period of Gastrodia elata30.430
SRR5643525five period of Gastrodia elata54.130
SRR5643528five period of Gastrodia elata50.390
SRR5643658five period of Gastrodia elata62.950
SRR5643659five period of Gastrodia elata20.590
SRR5643660five period of Gastrodia elata24.020
SRR5643661five period of Gastrodia elata23.710
SRR5643662five period of Gastrodia elata23.730
SRR5643663five period of Gastrodia elata22.340
SRR5643664five period of Gastrodia elata18.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.490
SRR6049655Rhizomagastrodiae_C368-T10_good_130.110
SRR6049656Rhizomagastrodiae_C368-T07_good_125.020
SRR6049657Rhizomagastrodiae_C368-T07_good_123.550
SRR6049658Rhizomagastrodiae_C368-T04_good_123.950
SRR6049659Rhizomagastrodiae_C368-T04_good_127.200
SRR6049660Rhizomagastrodiae_C368-T01_good_123.160
SRR6049661Rhizomagastrodiae_C368-T04_good_123.340
SRR6049662Rhizomagastrodiae_C368-T01_good_126.080
SRR6049663Rhizomagastrodiae_C368-T01_good_123.170
SRR6049664Rhizomagastrodiae_C368-T10_good_130.630
SRR6049665Rhizomagastrodiae_C368-T10_good_130.630
SRP279888GastroGastrodia elata tuber 27.38
JuvenJuvenile tuber25.87
Mother_GastroMother tuber of Gastrodia elata 45.94
Mother_JuvenMother tuber of Juvenile 36.14