Detail information of GWHGAAEX011944/evm.TU.scaffold_4.270


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108762091|ref|YP_629374.1|7.00E-11hypothetical protein MXAN_1114 [Myxococcus xanthus DK 1622]
KOGKOG32442.00E-117Protein involved in ubiquinone biosynthesis
nrgi|672112027|ref|XP_008803684.1|1.90E-128PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Phoenix dactylifera]
Swissprottr|Q9ZPR0|COQ4_ARATH7.00E-118Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03111} (Precursor)
trEMBLtr|Q60D93|Q60D93_ORYSJ4.00E-126Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial {ECO:0000256|HAMAP-Rule:MF_03111}
TAIRAT2G036902.00E-117coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001155952495603075-
Transcript Sequence

Network for GWHGAAEX011944

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05019.12Coq462202.00E-83
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006744Biological Processubiquinone biosynthetic process
GO:0005743Cellular Componentmitochondrial inner membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.210
SRR2545915Juvenile tuber22.700
SRP108465SRR5643513five period of Gastrodia elata25.310
SRR5643514five period of Gastrodia elata26.160
SRR5643515five period of Gastrodia elata22.360
SRR5643524five period of Gastrodia elata22.520
SRR5643525five period of Gastrodia elata42.030
SRR5643528five period of Gastrodia elata29.990
SRR5643658five period of Gastrodia elata46.940
SRR5643659five period of Gastrodia elata27.920
SRR5643660five period of Gastrodia elata34.590
SRR5643661five period of Gastrodia elata29.430
SRR5643662five period of Gastrodia elata43.630
SRR5643663five period of Gastrodia elata37.370
SRR5643664five period of Gastrodia elata54.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.860
SRR6049655Rhizomagastrodiae_C368-T10_good_118.570
SRR6049656Rhizomagastrodiae_C368-T07_good_128.990
SRR6049657Rhizomagastrodiae_C368-T07_good_140.950
SRR6049658Rhizomagastrodiae_C368-T04_good_145.370
SRR6049659Rhizomagastrodiae_C368-T04_good_153.210
SRR6049660Rhizomagastrodiae_C368-T01_good_138.070
SRR6049661Rhizomagastrodiae_C368-T04_good_134.500
SRR6049662Rhizomagastrodiae_C368-T01_good_121.670
SRR6049663Rhizomagastrodiae_C368-T01_good_129.730
SRR6049664Rhizomagastrodiae_C368-T10_good_126.020
SRR6049665Rhizomagastrodiae_C368-T10_good_126.020
SRP279888GastroGastrodia elata tuber 46.81
JuvenJuvenile tuber51.23
Mother_GastroMother tuber of Gastrodia elata 30.81
Mother_JuvenMother tuber of Juvenile 37.60