Detail information of GWHGAAEX011945/evm.TU.scaffold_4.271


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743852126|ref|XP_010940316.1|0PREDICTED: uncharacterized protein LOC105058929 [Elaeis guineensis]
Swissprottr|Q6DBN5|PUB62_ARATH4.00E-39U-box domain-containing protein 62
trEMBLtr|W1PN58|W1PN58_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERN09498.1}
TAIRAT3G129406.00E-372-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001156056075693203-
Transcript Sequence

Network for GWHGAAEX011945

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.540
SRR2545915Juvenile tuber8.760
SRP108465SRR5643513five period of Gastrodia elata16.780
SRR5643514five period of Gastrodia elata17.390
SRR5643515five period of Gastrodia elata14.790
SRR5643524five period of Gastrodia elata17.420
SRR5643525five period of Gastrodia elata20.390
SRR5643528five period of Gastrodia elata19.370
SRR5643658five period of Gastrodia elata18.220
SRR5643659five period of Gastrodia elata13.750
SRR5643660five period of Gastrodia elata12.720
SRR5643661five period of Gastrodia elata14.490
SRR5643662five period of Gastrodia elata12.380
SRR5643663five period of Gastrodia elata13.030
SRR5643664five period of Gastrodia elata13.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.820
SRR6049655Rhizomagastrodiae_C368-T10_good_124.410
SRR6049656Rhizomagastrodiae_C368-T07_good_118.270
SRR6049657Rhizomagastrodiae_C368-T07_good_116.950
SRR6049658Rhizomagastrodiae_C368-T04_good_115.510
SRR6049659Rhizomagastrodiae_C368-T04_good_115.470
SRR6049660Rhizomagastrodiae_C368-T01_good_114.600
SRR6049661Rhizomagastrodiae_C368-T04_good_114.330
SRR6049662Rhizomagastrodiae_C368-T01_good_116.630
SRR6049663Rhizomagastrodiae_C368-T01_good_118.700
SRR6049664Rhizomagastrodiae_C368-T10_good_122.870
SRR6049665Rhizomagastrodiae_C368-T10_good_122.870
SRP279888GastroGastrodia elata tuber 11.79
JuvenJuvenile tuber20.60
Mother_GastroMother tuber of Gastrodia elata 9.20
Mother_JuvenMother tuber of Juvenile 11.75