Detail information of GWHGAAEX011965/evm.TU.scaffold_4.310


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672164525|ref|XP_008802142.1|8.72E-76PREDICTED: LOW QUALITY PROTEIN: protein G1-like4 [Phoenix dactylifera]
Swissprottr|Q9LMK2|LSH6_ARATH3.00E-74Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6
trEMBLtr|B9HNA6|B9HNA6_POPTR5.00E-75Uncharacterized protein {ECO:0000313|EMBL:EEE87926.1}
TAIRAT1G070901.00E-73Protein of unknown function (DUF640)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001166504786651270-
Transcript Sequence

Network for GWHGAAEX011965

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04852.11DUF640261504.90E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.300
SRR2545915Juvenile tuber8.860
SRP108465SRR5643513five period of Gastrodia elata21.600
SRR5643514five period of Gastrodia elata27.950
SRR5643515five period of Gastrodia elata36.220
SRR5643524five period of Gastrodia elata34.410
SRR5643525five period of Gastrodia elata4.590
SRR5643528five period of Gastrodia elata14.790
SRR5643658five period of Gastrodia elata2.340
SRR5643659five period of Gastrodia elata10.880
SRR5643660five period of Gastrodia elata9.510
SRR5643661five period of Gastrodia elata4.320
SRR5643662five period of Gastrodia elata10.550
SRR5643663five period of Gastrodia elata3.930
SRR5643664five period of Gastrodia elata3.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.060
SRR6049655Rhizomagastrodiae_C368-T10_good_145.080
SRR6049656Rhizomagastrodiae_C368-T07_good_148.700
SRR6049657Rhizomagastrodiae_C368-T07_good_139.410
SRR6049658Rhizomagastrodiae_C368-T04_good_124.800
SRR6049659Rhizomagastrodiae_C368-T04_good_110.970
SRR6049660Rhizomagastrodiae_C368-T01_good_133.920
SRR6049661Rhizomagastrodiae_C368-T04_good_126.770
SRR6049662Rhizomagastrodiae_C368-T01_good_143.960
SRR6049663Rhizomagastrodiae_C368-T01_good_134.420
SRR6049664Rhizomagastrodiae_C368-T10_good_139.020
SRR6049665Rhizomagastrodiae_C368-T10_good_139.020
SRP279888GastroGastrodia elata tuber 2.77
JuvenJuvenile tuber15.98
Mother_GastroMother tuber of Gastrodia elata 10.60
Mother_JuvenMother tuber of Juvenile 2.89