Gene detail

Detail information of GWHGAAEX011971/evm.TU.scaffold_4.319

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743869395\|ref\|XP_010905802.1\|	PREDICTED: probable methyltransferase PMT3 [Elaeis guineensis]
Swissprot	tr\|Q940J9\|PMT8_ARATH	Probable methyltransferase PMT8
trEMBL	tr\|A0A059B2H1\|A0A059B2H1_EUCGR	Uncharacterized protein {ECO:0000313\|EMBL:KCW60323.1}
TAIR	AT3G23300	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	6919462	6930130	+

Transcript Sequence
>GWHTAAEX011971 TAGGTCAGAGCTGAAGACATTGGCGAAATTAATTTGACCAACTTTTGGCCAAAATGTCGATAAATCTCGAATCGCTCAGATTTGCGGAACGTGCGGACAGCCAGCCGACATCCCCTCTTCTCTCTCCGCCTCTTTTCCCATTTTTTGCTTCGCCAAGGTTTTCACGCTGCTCGAAATCCGATCCAGATCTCGACCGACGTTTAATAGATTCAGAGATTTATCGGAGTGAAAATAGTAGGTGTTTTGTTCGGAGGCATACAAATGACCATCGTTGATCATTGTTAGGATCATTTTGATTTTGTCAGTTGCGTGCTGTGATTGGCTTGGTGATTTATTAAATGCTATCATAATAGCTGCATAATCATTATTATTGCAAGAAGAATGAGGGGAAGAGCTGATGGAGTCCACAAGAAGCAGTTGGTATCATCCGTTTGTGTTGTTCTTCTAATTTTAGGTTTCTTGTTCATGTACTATGGTGGTCATCAAGGGCAGCAAGCAACCGGCACTGCTTTAGATTATGGTACCAAATTTTCAAAATCATTAGGATGGGGTGGCAATGATGATGGAGATGGTACCAAAACAGATGACTCTGCTTTTGGGCAAGAAGGTGGAGATGAAACTATCACACCCAAGAGCTTTCCTGTGTGTGATGATCGCCACATGGAGTTGATCCCTTGCCTGGATAGGAATCTAATTTACCAAACACGATTGAAGCTGGATCTTTCTTTGATGGAACATTATGAGAGACATTGTCCGCAGACTGAGAGGCGCTTCAATTGCTTGACCCCACCTCCCATTGGTTATAAGATTCCAATAAAGTGGCCAAAAAGCCGAGATGAAGTTTGGCAAGCGAACATTCCTCACACCCACCTTGCACACGAGAAGTCTGATCAAAACTGGATGGTTGTGAAAGGTGACAAGATACACTTCCCTGGTGGTGGCACCCATTTTCATTATGGTGCTGACAAATATATAGCTTCAATCGCAAATATGTTGAAATTTCCAAATGATATAATAAACAATGAAGGAAGATTGCGAACAGTCCTGGATGTCGGTTGCGGTGTTGCAAGTTTTGGAGGATATCTTCTTTCATCTAATGTCATAACAATGTCTCTGGCTCCAAACGATGTACACCAAAACCAGATTCAGTTTGCTTTAGAGAGAGGAATTCCTGCCTTTCTTGGTGTTTTAGGGACATGGAGACTTCCTTACCCTAGCAGGTCATTTGAGCTTGCTCATTGTTCTCGTTGCAGAATAGATTGGCTTCAAAGAGATGGAATCCTTCTACTAGAGTTAGATAGGCTACTAAGGCCAGGAGGTTATTTTGCTTATTCATCGCCCGAAGCATATGCACAGGATGAAGAGGATCTGAGAATATGGAGAAAAATGAGTGCACTGGTAGAACGCATGTGCTGGAAAATTGCTGCAAAACAAAATCAGACAGTTATTTGGGTCAAATCCTTAACAAATGATTGTTACATGGATAGAGCGCCTGGAACTAAGCCTCCTTTGTGTAGATCTGATGCTGATCCAGATGCAGTTTGGGATGTCAAAATGGAGGCTTGCATTACACCCTACTCGGAGCAGCAACATAGAGATAAAGGCAGTGAGTTGGCTCCATGGCCTGCCCGACTAACTTCCCCTCCTCCTAGACTCGCCGATTTTGGTTATTCTGCAGAAACTTTTGAGAAAGACACGGAGATTTGGCAGCAGAGAGTTGATGCTTACTGGAACCTATTAAGCCCCAAAATAACATCAAACACTATAAGAAACGTGATAGACATGAATGCAAACATGGGATCATTTGCAGCAGCCTTAAGGGATAAGGATGTCTGGGTTATGAATGCCGTGCAGCATGACGGTCCAAACACCCTTAAGATAATCTATGATAGAGGTCTCATTGGCACGCTTCATGATTGGTGCGAGTCATTCTCAACGTACCCGCGCACTTACGATCTCCTTCACGCTCAGGCCATCTTCTCTAGCATTGAGAAGAGGGGATGCGGGGCGGAGGATCTGCTCCTTGAGATGGATCGAATTCTCAGGCCGACTGGTTTCATCATCATTAGGGATTCTAGGGCGGTTATAGATCTGATCATCAAGTATTTACCGGCGCTGCACTGGGACTCACTAGCAGTGGTTGATTCGAATCCTGAAGACGGCGACTCCATCCTCTTGATTCAAAAGAAGCTGTGGCTCGTCGACGATAGCGGCCTCAAGGATTTATGATGAAGATTTGAAGTTTTTGATGAGGGAAAAGGATGGGTTATTTTTTAAAATCTGTTTTATTTTATTCTATTTTACACATTTTTGTTTGCTTGAAAATGAAATGTTTTGGCTTCATTATAGTCTCCTCTATTCTTCTGTTAATTTCAACTTGTTTGATGCCTGATAGGGTTAGTACTTCCGGATTAGCTGTGGCATTACTTCTGTGCTCTCACATTATTGCATCATCATGTTGTTATTTTTATATGTGATGAGCTTTGACTGTTTCTAACGTCCAAGCAAGATTGATA

Network for GWHGAAEX011971

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03141.15	Methyltransf_29	95	602	2.50E-227

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008168	Molecular Function	methyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	74.270
SRP064423	SRR2545915	Juvenile tuber	97.280
SRP108465	SRR5643513	five period of Gastrodia elata	75.060
	SRR5643514	five period of Gastrodia elata	58.990
	SRR5643515	five period of Gastrodia elata	76.610
	SRR5643524	five period of Gastrodia elata	63.150
	SRR5643525	five period of Gastrodia elata	64.480
	SRR5643528	five period of Gastrodia elata	85.880
	SRR5643658	five period of Gastrodia elata	64.870
	SRR5643659	five period of Gastrodia elata	105.840
	SRR5643660	five period of Gastrodia elata	109.130
	SRR5643661	five period of Gastrodia elata	102.140
	SRR5643662	five period of Gastrodia elata	102.510
	SRR5643663	five period of Gastrodia elata	108.660
	SRR5643664	five period of Gastrodia elata	83.510
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	68.550
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	72.770
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	64.540
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	66.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	49.630
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	47.550
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	60.970
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	58.940
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	75.850
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	65.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	67.690
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	67.690
SRP279888	Gastro	Gastrodia elata tuber	85.29
	Juven	Juvenile tuber	74.73
	Mother_Gastro	Mother tuber of Gastrodia elata	52.39
	Mother_Juven	Mother tuber of Juvenile	57.02