Gene detail

Detail information of GWHGAAEX011973/evm.TU.scaffold_4.321

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743780192\|ref\|XP_010920448.1\|	0	PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X3 [Elaeis guineensis]
Swissprot	tr\|Q8VZF6\|EDR2L_ARATH	4.00E-122	Protein ENHANCED DISEASE RESISTANCE 2-like
trEMBL	tr\|A0A096R0H0\|A0A096R0H0_MAIZE	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GRMZM2G069976_P01}
TAIR	AT3G54800	0	Pleckstrin homology (PH) and lipid-binding START domains-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	7058705	7118742	+

Transcript Sequence
>GWHTAAEX011973 AGAGAACCGGTGGAGAGCTAAGGGCGGAGCTGATATTTTACGTTTTCCGTCCTTGTTTTCGGAAGGCTGCCTCTCCTCTCTCCTCTCTCCCATCTCGCATTTTTCATTTTGTACACAGGAACTGGTCATCCTAGGAAAGGGGAAGAGAGCCAGGAAGACTCTTAGGTTAAAGTTTTGTAAGGTTCGTTGGAGAGGAGATCTCATATGGGTTTATCGCAGCCTGGGGATGATCGGAAAATGGAGGGCTGGCTCTATCTTATTCGATTCAATCGTTTCGGCCTGCAGTACTCAAGGAAACGATATTTCCTTCTCGAAAATAACGCCCTTAATTGCTACAAATCTGTTCCCGCTTCAAACACAGAGGTTCCTCTTCGTCGGGCACTTCTTGATTCCTGTATACGCGTAACAGATAATGGAAGGGAGAACGTACATAATAGTGTTCTTTTTATTTTTACTCTATACAATGCCTCTAATCATAATGATCAACTTAAGTTGGGTGCTAGTAGCTCAGAAGAAGCTGCTAGGTGGATAAGAGCTTTAATGGAAACGACTCTGAAGGAATGCGCTGTTAAAGGAGATAACGTGGTGTCCTGCTCAAAACGAAAATGGCAATCATTTAGGTTGAGTAGAGGTAGAAGCCGAATGCACTCCATCAATTGGACTGCCTTCTCATCCATTCATTCAGATTTAATGACGTCTGATGTTGTTGCACCATCCCCTTGGACTATATTCGGATGTAACAATGGATTGCGGCTTTTTAAGGAAGCTAAGGATGGTGACTTTGATGAGAAGTATTGGGATGATCACCCTGCTATAATGGCAGTAGGTGTTGTAGATGCACCGTCTGAGGCAATTTTTCAGACAGTTATGTCTCTTGGCCCATCAAGATCAGAATGGGACTTCTGTTTTTCCGAAGGCAGTGTTGTTGAACATTTGGACGGGCATAATGATATTATCCACAAAAAGTTAAAGAGCCATTGGCTACCTTGGGGAATGAAAAGAAGAGATTTGCTATTAAGACGTTATTGGAGGAGGGAAGATGATGGAACTTATGTTATATTATACCACTCCATGCTCCACCAAAATTGTCTGCCACAGAGAAGCTATATTCGAGCCTGCCTTAAAAGTGGAGGGTATGTAATCTCCCCTATTAATCAAGGGAAAAAGTCTGTTGTTAAGCATATGCTTGCAATTGATTGGAGATTTTGGAGATCTTATCTGCTGACCACTTCTTCTAAAAGAATTACAATCCGGATGCTTGGAAGAATTGCTGCCTTGAGGGAATTGTTTCGAGCAAAAATTGATAACCACCAATGCTCTGAGTTTTCATCAAGTGAACTTGCATTGATTACATCTATGCCACATGCTAAATATGAAGAAATCAAGGGGGAAGTGCAGTCTGGAGTTGGAAATAGCAACAATGGAGGGGTTATTGGAGAATCTATTCAATCTCCTACTATAGCTCCTACTTTGTCGGAAACCTTGAGTTTGTCATTTGTTTCAGATGAATTCTTTGATGTTCAGGATGAATCAGAGTCTGATCAGGCTGAAGCCTTGTGGCCATCTGAGGTAGAACGCCAGCCTAAACTGTCAGCAGCTGCAGGCCTTGTGAAAAGGTTGCATGGTCTTGCAGCTCAAAAGAAAGGTTATATTGATTTACAAGAAGCTTTACATGAGGATACGATACCATGCAGTTATGGGACAACTCTCATGAAGGATGCAACATTTAGTGTTCCTTGTAGTTGGGCTGAGACAGAACCTTCAACATTTTTGATTCGTAGTGAAAGCTATCTTAGTAACCGCCATAAGGAAAAAGCCAATGGCTCGTTGATGCAAATGGTGGCTGCTGATTGGGTAAAATCGGATAAACGTGAAGATGATCTTGGCGGCAGACCCGGTAGCATTGTGCAGAAATACGCAAACCAAGGTGGCAATGAGTTTTTCTTCATTGTCAACATCCAGGTTCCTGGCTCGACTACGTTCTCTCTTGCTCTGTACTATCTCATGCACATCCCTGTTGAAAGCGTGCCACTGCTGGAGCGCTTTGTTAAAGGGGATGATGCTTTCAGAAATTCAAGGTTTAAGCTCATTCCATATATATCAAAGGGCTCTTGGATAGTGAAGCAAAGCGTGGGAAAAAAGGCATGCCTGATTGGCCAAGCGTTGGAAATAAATTATTTTCGCGGGAAAAATTACATAGAGCTCGGAGTCGATATCGGCTCGTCAACAGTAGCCAGAGGGGTCGTCAGCCTTGTTCTTGGTTGCCTGACCAATCTTGTCATAGAGATGGCATTCCTTATACAAGGCGACACGGAAGAAGAGTTGCCGGAGTTCCTCCTCGGAACCTGCCGCCTGAATCATTTGGATGCTTCCAGAGCTGTTTCAATCACTCCTTGGAAGTGTTAAAAGGTGTTCAGCATGTGCTTTTCACGCGCGACTCCCTTTTTGGCTTTGGTCTTTATTGTTATTATTGTGCATATTCATAATTACAAAAAAAATGGAAAGAGAAAAAACAACTTTTTCAAATAGAAATCATTCTTTGCACAGAACGACACAGCTGTATGTATCATAATGTAGTTTGTATCTGATGGTTTAAATATAAATAATTAAAGTTTCGCAAGAGCTTCATCGCTTATTGTTCCTCA

Network for GWHGAAEX011973

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00169.28	PH	11	113	1.30E-08
PF01852.18	START	200	332	1.30E-16
PF07059.11	DUF1336	514	721	2.00E-65

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008289	Molecular Function	lipid binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.360
SRP064423	SRR2545915	Juvenile tuber	17.810
SRP108465	SRR5643513	five period of Gastrodia elata	12.400
	SRR5643514	five period of Gastrodia elata	15.060
	SRR5643515	five period of Gastrodia elata	12.590
	SRR5643524	five period of Gastrodia elata	12.400
	SRR5643525	five period of Gastrodia elata	9.860
	SRR5643528	five period of Gastrodia elata	8.270
	SRR5643658	five period of Gastrodia elata	12.890
	SRR5643659	five period of Gastrodia elata	7.040
	SRR5643660	five period of Gastrodia elata	8.130
	SRR5643661	five period of Gastrodia elata	7.870
	SRR5643662	five period of Gastrodia elata	8.010
	SRR5643663	five period of Gastrodia elata	8.060
	SRR5643664	five period of Gastrodia elata	9.130
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.690
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.490
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.180
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.830
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.890
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.830
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.280
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.330
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.330
SRP279888	Gastro	Gastrodia elata tuber	13.38
	Juven	Juvenile tuber	19.39
	Mother_Gastro	Mother tuber of Gastrodia elata	24.60
	Mother_Juven	Mother tuber of Juvenile	36.13