Detail information of GWHGAAEX011989/evm.TU.scaffold_4.344


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19444.00E-77Peroxisomal membrane protein MPV17 and related proteins
nrgi|573954957|ref|XP_006659719.1|4.02E-107PREDICTED: peroxisomal membrane protein PMP22-like [Oryza brachyantha]
Swissprottr|Q9ZS51|PMP22_ARATH1.00E-77Peroxisomal membrane protein PMP22
trEMBLtr|J3MVG4|J3MVG4_ORYBR1.00E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:OB08G30950.1}
TAIRAT4G044704.00E-77Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001180383978055753+
Transcript Sequence

Network for GWHGAAEX011989

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04117.11Mpv17_PMP221141731.50E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13347PXMP2, PMP22 Peroxisome map04146

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms103.360
SRR2545915Juvenile tuber102.980
SRP108465SRR5643513five period of Gastrodia elata91.440
SRR5643514five period of Gastrodia elata134.450
SRR5643515five period of Gastrodia elata99.070
SRR5643524five period of Gastrodia elata146.880
SRR5643525five period of Gastrodia elata77.580
SRR5643528five period of Gastrodia elata118.590
SRR5643658five period of Gastrodia elata78.620
SRR5643659five period of Gastrodia elata73.410
SRR5643660five period of Gastrodia elata70.870
SRR5643661five period of Gastrodia elata73.710
SRR5643662five period of Gastrodia elata54.890
SRR5643663five period of Gastrodia elata70.660
SRR5643664five period of Gastrodia elata43.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_185.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1143.680
SRR6049656Rhizomagastrodiae_C368-T07_good_1113.710
SRR6049657Rhizomagastrodiae_C368-T07_good_160.110
SRR6049658Rhizomagastrodiae_C368-T04_good_174.800
SRR6049659Rhizomagastrodiae_C368-T04_good_161.820
SRR6049660Rhizomagastrodiae_C368-T01_good_171.510
SRR6049661Rhizomagastrodiae_C368-T04_good_159.710
SRR6049662Rhizomagastrodiae_C368-T01_good_1111.180
SRR6049663Rhizomagastrodiae_C368-T01_good_199.890
SRR6049664Rhizomagastrodiae_C368-T10_good_1165.340
SRR6049665Rhizomagastrodiae_C368-T10_good_1165.340
SRP279888GastroGastrodia elata tuber 74.59
JuvenJuvenile tuber55.68
Mother_GastroMother tuber of Gastrodia elata 82.73
Mother_JuvenMother tuber of Juvenile 64.25