Detail information of GWHGAAEX011994/evm.TU.scaffold_4.349
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|530780196|ref|YP_008432001.1| | 4.00E-23 | hypothetical protein N186_03080 [Thermofilum sp. 1910b] |
| KOG | KOG3351 | 7.00E-67 | Predicted nucleotidyltransferase |
| nr | gi|720065041|ref|XP_010276148.1| | 4.92E-71 | PREDICTED: phosphopantetheine adenylyltransferase [Nelumbo nucifera] |
| Swissprot | tr|Q6ZLC4|COAD1_ORYSJ | 3.00E-70 | Phosphopantetheine adenylyltransferase 1 |
| trEMBL | tr|K3ZX74|K3ZX74_SETIT | 1.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si031206m} |
| TAIR | AT2G18250 | 7.00E-67 | 4-phosphopantetheine adenylyltransferase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 8192726 | 8204070 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011994
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01467.25 | CTP_transf_like | 28 | 165 | 3.60E-07 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K02201 | E2.7.7.3B | Metabolic pathways | map01100 |
| Pantothenate and CoA biosynthesis | map00770 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009058 | Biological Process | biosynthetic process |
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 25.590 |
| SRR2545915 | Juvenile tuber | 27.580 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 24.230 |
| SRR5643514 | five period of Gastrodia elata | 18.360 | |
| SRR5643515 | five period of Gastrodia elata | 20.930 | |
| SRR5643524 | five period of Gastrodia elata | 18.490 | |
| SRR5643525 | five period of Gastrodia elata | 15.650 | |
| SRR5643528 | five period of Gastrodia elata | 12.220 | |
| SRR5643658 | five period of Gastrodia elata | 11.530 | |
| SRR5643659 | five period of Gastrodia elata | 19.210 | |
| SRR5643660 | five period of Gastrodia elata | 17.560 | |
| SRR5643661 | five period of Gastrodia elata | 23.530 | |
| SRR5643662 | five period of Gastrodia elata | 16.860 | |
| SRR5643663 | five period of Gastrodia elata | 13.690 | |
| SRR5643664 | five period of Gastrodia elata | 19.860 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 13.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 31.690 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.190 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.550 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.930 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.890 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 24.350 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 39.630 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 31.800 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 27.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 27.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 26.74 |
| Juven | Juvenile tuber | 17.31 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 18.32 | |
| Mother_Juven | Mother tuber of Juvenile | 14.29 |