Gene detail

Detail information of GWHGAAEX012007/evm.TU.scaffold_4.369

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2056	4.00E-125	Equilibrative nucleoside transporter protein
nr	gi\|672112762\|ref\|XP_008807497.1\|	0	PREDICTED: LOW QUALITY PROTEIN: clathrin interactor EPSIN 2-like [Phoenix dactylifera]
Swissprot	tr\|Q67YI9\|EPN2_ARATH	1.00E-135	Clathrin interactor EPSIN 2
trEMBL	tr\|B5RHS9\|B5RHS9_MUSBA	0	Epsin N-terminal homology (ENTH) domain-containing protein {ECO:0000313\|EMBL:BAG70978.1}
TAIR	AT3G59290_1	4.00E-125	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	8784724	8809061	+

Transcript Sequence
>GWHTAAEX012007 GAAGGCGTAAAATTATTTTGTCCCGCGTTGAAAAAAATTTCGCACCGACACGTGTCGTTCTTCCGAAGCTCCGCTCGCTCCCGCACCTTCACCTCGCCACCTCCATTCCTTTTCTCTTTCATTGTTCCTCCAAATCCCCTTTACGTTTTTACCTTCCCAACTATCGGCTCCACCCAAAGGGAGAGCCCGCCGGCCAATACGCCTCTCTTAATCACCATAAATAGTGAAATCTTTTGTCGCCGGAGCTCCTCCAGATCTTGATCGAATAGCTAATTGCCGTTGGTATCCATCCATTGACTTCTAATCGGCCTTTGCTAGATCGAATCTTTTTCGTTTTCACCGGAGCTTCTTCTGCTTCGTTGATCTGAAACCCTGTGCTTAATCATATAAGGTGATTTGATTCTGTTCACCTGCACCATGAAGAAAGCTTTTGATCAAACTGTTAGGGATCTAAAGAGAGAGGTTAACAAAAAGGTTTTGAAGGTACCTGGAATTGAGCAAAAGATTCTCGATGCAACAAGCAATGAACCTTGGGGTCCACATGGGACACTTTTGGCCGATATTGCACAGGCTACCCGAAATTATCATGAGTATCAAATAATCATGCATGTGATCTGGAAGAGGCTTAATGATACTGGAAAAAATTGGCGCCATGTATATAAGTCCTTGACTGTCTTGGAATTTCTTGCTGGGCATGGATCTGAACGAGTAGTTGATGAGATCAAGGAGCATGCTTACCAAATATCAACTCTTTCTGACTTCCAGTATATTGATTCAAGTGGAAAGGATCAGGGGAATAATGTTCGAAGAAAATCTCAGATCCTTGTTTCACTTGTTAATGATAAAGAGAAAATACAGGAAACTAGACAAAAAGCACTTGCAAACAAAGACAAGTATCGTTCTACATTTTCATCAAGTGGATCTCATAGGCCGGGTTCTATTTCAAGTGCTGGCGGTTATGGTGACCGTTATGATGATGATCGTTATGACGGCCGTTATGGAAGTAGAGATGATGATCGAAATGGATATGGCAGGGAAAGAGATTTGGGTTATAGAGATGATGATAGGTATGCTAGAGGTGGAGACTACAATAGAGATGGCGATGGGTTTGGTAGAGATTCTGATGAGCATTCTGGAAGAGGTAGTTACAAAAGTGATGATAATCGAAGTAGTAGAGGTGGTGATGATTACCAAATTGGTCAAAGAAACAAGAGTTTTGATAAAGACAAAGATCATTCATATGAAGAAGACGATAGCTACTCCTATCGAAATGGTGGTGTCAGGGCCAATGATGCATCTCCCGATGCAAGGAACCTTGAGTCTAAGCTTTCAGAACAAAGGGCTAACGCACCACCTAGCTATGAATCATCAGTTAGAAATGATAATAATACTGTTCAGGATGATAGGGGAGGGATTGGAACAGCGGCTGTCCCCAAAGCATCATCCCCACAGAATAATTATAATGGAGAGCACGGGACTTTTCTTCCAGGAGCACATATTTTGCCTACGAGAATGGATGATAATTCTTTTGATGAATTTGATCCTCGAGGTTTCACCCCAGCTGTAAATTTTGCTCCCCCAGCTGCTAATTCTGCTGCGCCAGCTGCTGCTGGTGGTTCGATCATAGATTTCTTTTCGGACTCGTCGTCATTGGACCCAGCGAACTCTTTGGCCCTTGTGCTGACATCTCCGCCCCCACCAGCTGTTGAAGCCGAGGTTGCTTCAACAAGTTCCGGATTCGGAACAAATTTTGTGGCTTTGCCATCAGCTTCTGTTGCATTAAGCCAGCCTACCGAAGATCCATTTGGAGATAGCCCTTTCAAAGCCATTCCACAAGAAAATTTTCTACCTCAGGGGCAGAACTCGATGCCCGCAGTATCAGCTTCAGCCCCTTCTTTCCCTCCGTCTGCTACCTCAATGTCACCCGTGGAGTCCATCACACACCCGGGCCCGTTGGTCTATTCTTCTTCATTGAACTTTGATTTTGGCGAGCCATTAGCCGGTCTGAGCTACACTCCCACCATCCCAAACGATCCGCCGTATCCTGCAAACTCAATACCAGCCATTCAGGAGTTTCCGCTGGCTCAGCCGAGCATTGATTTTATGGCCCCTACACAGGCAGCAGCAAGGGCAGCCTATGGCCACCCGTTCTTTCCGTCACCCGGATTAGCCGCCTTTTCCTTGCCCGCACCCCAACCTTTCGGTCCCTCAAGTGCACCGTCAGATGGCATGGCATCAATCCCGCAGCTTGCCACTCTGCCCATTCCGCCGTCAGCTCAACAGCCTGTAGCTCAAGAGAATACGCCAGTGGCCCCGAGATCGAGTATTGCCGCACGACCTTCGGGCTCAAAGCAATCGCCGGATGCGTTTGAGACCAAATCATCAGTTTGGGCCGACACTCTGAACCGGGGTCTCGTCAACCTTAACATTTCCGGGTCCAAGACCAATCCATTGGCCGATATAGGAGTGGACTTCGATTCGATCAATAGGATGGAGAGACGGAAGGAGAAGGAGAAGGCGCCGTCCGCAAACCCTCTCACTTCGACGGCCACGATGGGGAAAGCCATGGGCACAGGCTCTGGCGTCGGCCGTTCCGGTGCTGCTGCTGGTGGGGCTGCCATCAACCCATCATTGAGGCCCATGATTGGGCATCCCGGCATGGGCATGGGGATGGTGATGACCCCCACTGGTGGGGCCGGCAGTTTGGGTATGGGAATCGGCGGACCCATGAATCAGCCATCCTTGGGCGTGGGCATGAGCATGGGCATGGGCATGGGAGGTCCTATGAATCAGTCCCTTCCTCAAGGCTATCCTGGGCCGAGCTACACTCCATCCATGATGGGCATGGGTGGGTATGGCTCTCATCAACCATATGGCGGCAGCAATGGTGGTGGCTACAGGTGAAAGGAGACGAACAAATGCTTGTGTTGTAGCTCAAGAAGTATTGTTCTCGGTTATCGATGCTGAGCAGCATATTGATTGATCGTATCAGTGTGTGAATCTTCCTTGATTGCTCGTGGCGTACTATTTTTTTTTATTATTATTTTTCAGGATGCAGTGTTGGTGAAAGGGAATGTGTCTATATATTATATGTATAAAAATACACAGATCAAATCATTCTTGACCATGAAGCTTCTGCTTAATGCAAAGCTGTTACATTTTCCCTTTTTCATTTTTTTATAATTTTATTATTTGAATCTGGCATATATAGCTGAGGAAGAGTGGAGAAAGGGAATTCTCATTATGTTCTTCTTCGCTTGGTTTTTGTGTTTCGGAAAGTATTAGAGGAACTTGTTATTGGCATTATTATGGGCTGCAGTTCGTAAAGTTGATGCAGAATCTCATGTATTTGATGCTGTGTTCTTATATTTTTGTCTATGTTGTTTAATTCAATCAAGACTTCATAGTGGTTCTATCTGAG

Network for GWHGAAEX012007

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01417.19	ENTH	26	145	4.20E-45

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12471	EPN	Endocytosis	map04144

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	85.270
SRP064423	SRR2545915	Juvenile tuber	70.550
SRP108465	SRR5643513	five period of Gastrodia elata	68.530
	SRR5643514	five period of Gastrodia elata	55.350
	SRR5643515	five period of Gastrodia elata	64.480
	SRR5643524	five period of Gastrodia elata	57.720
	SRR5643525	five period of Gastrodia elata	98.450
	SRR5643528	five period of Gastrodia elata	92.580
	SRR5643658	five period of Gastrodia elata	124.330
	SRR5643659	five period of Gastrodia elata	62.340
	SRR5643660	five period of Gastrodia elata	69.460
	SRR5643661	five period of Gastrodia elata	69.360
	SRR5643662	five period of Gastrodia elata	78.850
	SRR5643663	five period of Gastrodia elata	70.450
	SRR5643664	five period of Gastrodia elata	81.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	71.610
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	78.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	72.940
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	84.520
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	87.450
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	97.660
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	80.630
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	81.190
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	62.400
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	73.630
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	68.410
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	68.410
SRP279888	Gastro	Gastrodia elata tuber	72.99
	Juven	Juvenile tuber	82.84
	Mother_Gastro	Mother tuber of Gastrodia elata	90.19
	Mother_Juven	Mother tuber of Juvenile	87.09