Detail information of GWHGAAEX012009/evm.TU.scaffold_4.374


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|148655657|ref|YP_001275862.1|2.00E-17protein kinase [Roseiflexus sp. RS-1]
KOGKOG11640Casein kinase (serine/threonine/tyrosine protein kinase)
nrgi|743829974|ref|XP_010934295.1|0PREDICTED: casein kinase I-like isoform X1 [Elaeis guineensis]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|D7SZI3|D7SZI3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI23660.3}
TAIRAT3G233400casein kinase I-like 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001189157508933232+
Transcript Sequence

Network for GWHGAAEX012009

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase102276.70E-29
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCK1_CK1

KEGG pathway

KO Enzyme pathway mapID
K08960CSNK1E Wnt signaling pathway map04310
Hedgehog signaling pathwaymap04340
Hedgehog signaling pathway - flymap04341
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
Hippo signaling pathway - multiple speciesmap04392
FoxO signaling pathwaymap04068
Circadian rhythmmap04710
Circadian rhythm - flymap04711

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.290
SRR2545915Juvenile tuber0.640
SRP108465SRR5643513five period of Gastrodia elata0.690
SRR5643514five period of Gastrodia elata0.440
SRR5643515five period of Gastrodia elata0.510
SRR5643524five period of Gastrodia elata1.020
SRR5643525five period of Gastrodia elata1.190
SRR5643528five period of Gastrodia elata1.340
SRR5643658five period of Gastrodia elata0.970
SRR5643659five period of Gastrodia elata0.520
SRR5643660five period of Gastrodia elata1.140
SRR5643661five period of Gastrodia elata1.250
SRR5643662five period of Gastrodia elata0.700
SRR5643663five period of Gastrodia elata0.870
SRR5643664five period of Gastrodia elata1.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.470
SRR6049655Rhizomagastrodiae_C368-T10_good_11.560
SRR6049656Rhizomagastrodiae_C368-T07_good_10.630
SRR6049657Rhizomagastrodiae_C368-T07_good_11.120
SRR6049658Rhizomagastrodiae_C368-T04_good_11.610
SRR6049659Rhizomagastrodiae_C368-T04_good_12.190
SRR6049660Rhizomagastrodiae_C368-T01_good_11.080
SRR6049661Rhizomagastrodiae_C368-T04_good_10.570
SRR6049662Rhizomagastrodiae_C368-T01_good_10.690
SRR6049663Rhizomagastrodiae_C368-T01_good_10.590
SRR6049664Rhizomagastrodiae_C368-T10_good_10.550
SRR6049665Rhizomagastrodiae_C368-T10_good_10.550
SRP279888GastroGastrodia elata tuber 0.52
JuvenJuvenile tuber0.49
Mother_GastroMother tuber of Gastrodia elata 1.82
Mother_JuvenMother tuber of Juvenile 0.96