Detail information of GWHGAAEX012019/evm.TU.scaffold_4.391


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|2.00E-29serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|728835053|gb|KHG14496.1|0Calcium-dependent protein kinase 28 [Gossypium arboreum]
Swissprottr|Q9FKW4|CDPKS_ARATH0Calcium-dependent protein kinase 28
trEMBLtr|B9MXG0|B9MXG0_POPTR0Uncharacterized protein {ECO:0000313|EMBL:ERP60899.1}
TAIRAT5G662100calcium-dependent protein kinase 28

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001193194689381566+
Transcript Sequence

Network for GWHGAAEX012019

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase863464.30E-66
PF13499.5EF-hand_73934543.70E-08
PF13499.5EF-hand_74755277.10E-10
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.150
SRR2545915Juvenile tuber26.620
SRP108465SRR5643513five period of Gastrodia elata31.210
SRR5643514five period of Gastrodia elata27.830
SRR5643515five period of Gastrodia elata30.990
SRR5643524five period of Gastrodia elata27.160
SRR5643525five period of Gastrodia elata31.870
SRR5643528five period of Gastrodia elata27.650
SRR5643658five period of Gastrodia elata28.450
SRR5643659five period of Gastrodia elata25.180
SRR5643660five period of Gastrodia elata25.830
SRR5643661five period of Gastrodia elata25.680
SRR5643662five period of Gastrodia elata29.910
SRR5643663five period of Gastrodia elata27.140
SRR5643664five period of Gastrodia elata27.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.020
SRR6049655Rhizomagastrodiae_C368-T10_good_125.200
SRR6049656Rhizomagastrodiae_C368-T07_good_133.300
SRR6049657Rhizomagastrodiae_C368-T07_good_136.170
SRR6049658Rhizomagastrodiae_C368-T04_good_138.220
SRR6049659Rhizomagastrodiae_C368-T04_good_141.200
SRR6049660Rhizomagastrodiae_C368-T01_good_140.420
SRR6049661Rhizomagastrodiae_C368-T04_good_138.700
SRR6049662Rhizomagastrodiae_C368-T01_good_141.840
SRR6049663Rhizomagastrodiae_C368-T01_good_141.560
SRR6049664Rhizomagastrodiae_C368-T10_good_132.390
SRR6049665Rhizomagastrodiae_C368-T10_good_132.390
SRP279888GastroGastrodia elata tuber 21.91
JuvenJuvenile tuber18.54
Mother_GastroMother tuber of Gastrodia elata 28.94
Mother_JuvenMother tuber of Juvenile 22.61