Detail information of GWHGAAEX012021/evm.TU.scaffold_4.394


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743778988|ref|XP_010919958.1|1.12E-50PREDICTED: transcription factor MYC4-like [Elaeis guineensis]
Swissprottr|Q39204|MYC2_ARATH1.00E-43Transcription factor MYC2
trEMBLtr|M0YQ42|M0YQ42_HORVD1.00E-49Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_71611.1} (Fragment)
TAIRAT1G326404.00E-43Basic helix-loop-helix (bHLH) DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001195359049537566+
Transcript Sequence

Network for GWHGAAEX012021

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH751211.90E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
K13422MYC2 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms75.350
SRR2545915Juvenile tuber83.760
SRP108465SRR5643513five period of Gastrodia elata99.880
SRR5643514five period of Gastrodia elata49.830
SRR5643515five period of Gastrodia elata172.230
SRR5643524five period of Gastrodia elata14.680
SRR5643525five period of Gastrodia elata244.480
SRR5643528five period of Gastrodia elata97.440
SRR5643658five period of Gastrodia elata110.980
SRR5643659five period of Gastrodia elata303.040
SRR5643660five period of Gastrodia elata67.560
SRR5643661five period of Gastrodia elata193.250
SRR5643662five period of Gastrodia elata455.170
SRR5643663five period of Gastrodia elata208.520
SRR5643664five period of Gastrodia elata1049.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1412.310
SRR6049655Rhizomagastrodiae_C368-T10_good_1238.490
SRR6049656Rhizomagastrodiae_C368-T07_good_1252.430
SRR6049657Rhizomagastrodiae_C368-T07_good_1342.560
SRR6049658Rhizomagastrodiae_C368-T04_good_1401.420
SRR6049659Rhizomagastrodiae_C368-T04_good_1541.010
SRR6049660Rhizomagastrodiae_C368-T01_good_1426.930
SRR6049661Rhizomagastrodiae_C368-T04_good_1411.960
SRR6049662Rhizomagastrodiae_C368-T01_good_1122.900
SRR6049663Rhizomagastrodiae_C368-T01_good_1314.160
SRR6049664Rhizomagastrodiae_C368-T10_good_1219.630
SRR6049665Rhizomagastrodiae_C368-T10_good_1219.630
SRP279888GastroGastrodia elata tuber 140.13
JuvenJuvenile tuber11.24
Mother_GastroMother tuber of Gastrodia elata 65.28
Mother_JuvenMother tuber of Juvenile 10.66