Detail information of GWHGAAEX012022/evm.TU.scaffold_4.395
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0916 | 0 | 1,3-beta-glucan synthase/callose synthase catalytic subunit |
| nr | gi|743832552|ref|XP_010935011.1| | 0 | PREDICTED: callose synthase 10 [Elaeis guineensis] |
| Swissprot | tr|Q9SJM0|CALSA_ARATH | 0 | Callose synthase 10 |
| trEMBL | tr|A0A072V9X9|A0A072V9X9_MEDTR | 0 | Callose synthase-like protein {ECO:0000313|EMBL:KEH34985.1} |
| TAIR | AT3G07160 | 0 | glucan synthase-like 10 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 9537621 | 9648652 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012022
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14288.5 | FKS1_dom1 | 345 | 454 | 4.10E-41 |
| PF02364.14 | Glucan_synthase | 1027 | 1723 | 3.70E-240 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT48 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006075 | Biological Process | (1->3)-beta-D-glucan biosynthetic process |
| GO:0003843 | Molecular Function | 1,3-beta-D-glucan synthase activity |
| GO:0016020 | Cellular Component | membrane |
| GO:0000148 | Cellular Component | 1,3-beta-D-glucan synthase complex |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 55.500 |
| SRR2545915 | Juvenile tuber | 45.170 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 26.390 |
| SRR5643514 | five period of Gastrodia elata | 27.590 | |
| SRR5643515 | five period of Gastrodia elata | 24.420 | |
| SRR5643524 | five period of Gastrodia elata | 26.550 | |
| SRR5643525 | five period of Gastrodia elata | 24.410 | |
| SRR5643528 | five period of Gastrodia elata | 16.950 | |
| SRR5643658 | five period of Gastrodia elata | 20.060 | |
| SRR5643659 | five period of Gastrodia elata | 26.160 | |
| SRR5643660 | five period of Gastrodia elata | 28.150 | |
| SRR5643661 | five period of Gastrodia elata | 25.260 | |
| SRR5643662 | five period of Gastrodia elata | 25.200 | |
| SRR5643663 | five period of Gastrodia elata | 28.870 | |
| SRR5643664 | five period of Gastrodia elata | 29.060 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 31.010 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 26.220 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.840 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 33.360 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 38.680 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 41.780 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 33.010 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 39.550 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 31.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 33.600 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.680 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.680 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.56 |
| Juven | Juvenile tuber | 39.66 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 36.11 | |
| Mother_Juven | Mother tuber of Juvenile | 39.57 |