Detail information of GWHGAAEX012049/evm.TU.scaffold_4.429
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2552 | 2.00E-168 | Major facilitator superfamily permease - Cdc91p |
| nr | gi|695004002|ref|XP_009388331.1| | 0 | PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like [Musa acuminata subsp. malaccensis] |
| trEMBL | tr|M0S914|M0S914_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P18230_001} |
| TAIR | AT1G12730 | 2.00E-168 | GPI transamidase subunit PIG-U |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 10948334 | 10971402 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012049
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF06728.12 | PIG-U | 63 | 451 | 7.80E-107 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05293 | PIGU | Metabolic pathways | map01100 |
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016255 | Biological Process | attachment of GPI anchor to protein |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0042765 | Cellular Component | GPI-anchor transamidase complex |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.170 |
| SRR2545915 | Juvenile tuber | 14.260 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.080 |
| SRR5643514 | five period of Gastrodia elata | 17.400 | |
| SRR5643515 | five period of Gastrodia elata | 14.170 | |
| SRR5643524 | five period of Gastrodia elata | 15.820 | |
| SRR5643525 | five period of Gastrodia elata | 11.020 | |
| SRR5643528 | five period of Gastrodia elata | 10.450 | |
| SRR5643658 | five period of Gastrodia elata | 12.190 | |
| SRR5643659 | five period of Gastrodia elata | 13.940 | |
| SRR5643660 | five period of Gastrodia elata | 10.600 | |
| SRR5643661 | five period of Gastrodia elata | 12.680 | |
| SRR5643662 | five period of Gastrodia elata | 12.140 | |
| SRR5643663 | five period of Gastrodia elata | 13.120 | |
| SRR5643664 | five period of Gastrodia elata | 8.560 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.700 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.450 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.740 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 14.250 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.300 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.250 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 15.380 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.710 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 27.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.890 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 18.630 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 18.630 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 11.62 |
| Juven | Juvenile tuber | 8.53 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 12.77 | |
| Mother_Juven | Mother tuber of Juvenile | 7.36 |