Gene detail

Detail information of GWHGAAEX012050/evm.TU.scaffold_4.432

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672111062\|ref\|XP_008798738.1\|	4.28E-78	PREDICTED: uncharacterized protein LOC103713546 [Phoenix dactylifera]
trEMBL	tr\|M0SPD2\|M0SPD2_MUSAM	9.00E-79	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P16180_001}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	11116106	11134079	+

Transcript Sequence
>GWHTAAEX012050 GTAGTCTTCCCACCGAGCTTAACCAGTGGAGTGGCTATTGATCAACATAGCGCATTCGATCCCCATGGCAACCAAACTCCAGTACAGTCAGCGTGAGCCTCCAAAGGAGCCGTTCAATGCGGGCAGAGAAGGGGCGGCCAACCGAAGCGAGGTGAGGCGGCAGCCAAGCGCCAGCCGGAGGACACAGGAGTGGATTGAGGAGGCCCGGAGGATGGTTGCCACTGGCTCGCCCAGCTCGCGGCGGGCTTCTCCCGCTCGTTTTGCGGGCACGCCGAGATTCGCCGCCGCTCTGCAGGCCCGAAACCGCCCGCCACCGTTCCCGCCGGCGAAGCCGGCCGAGGAGGCGCACCGCTCCTCTGGGTCTGTGAGAAGGAGCAGGAGCCAGTCCATCAGCGACGAGATTCTCCAGCGATCGACTGCACGGTACAGCCGCAGCGGCTCCTCGAGCTTCCCCTTTGTCAGAGAGGCCTCTCCCTTGTCATTCACTGAAAGGCTTTCCCCTCCTCGAAACCCGCACGAAGGCGCGGAAAGGATCAACACGTTTCTGCGGCGGCAAAGGGTGATGATAGGGAAGGTCTCCGCGAAGTTCGAGATCGTCCTGTCTTCGTCCACCCCCAGCGCGAGCTCAATGGCGGCGGTTATGGGCTACGCGTGGCTGCTGGAGAACACGATGGGAAGCGCTAATAATGGCAAGCTGGCGGTGGTGCCGGTCATCAACATGAGGAGGAAGAAGATGTGGGAACACAAGCAGGCTTCCTGGCTCTTTCATCACCTCGGAATCGATGCTTCTGCTCTGCTCTTCTCCGATGAGTTAGACTTGGAAGGACTTATAATGGGAAAGCAACTTTGCTTAAATGTTGTGGGGCAAGATGTATTGCAAACAAAAGGAGAGGTTGGATCTCTATGTACAATCCTAACTGATAACTACTGTGAAGATGCCTATGACCTACTTCAAAATCATAATTTAAGAAATCTCCTTCTTGCAGGAATTCTATTAGATACTCAAAATCTTAGCACTGTTGTCAGGTCATTTACAAGTAGAGATGCAGAAGCTGTGCAATTGCTTTTGGTTGGCTCTTCTCTTGATTATAGGGATTCATTCTATGAGCAAATGGTCAAAGAACATCAAGAAGAATCATTTATCAAATATATGGAAAACTATTTTGGGAAGCTTTCTATTGAAGTGAATGAGAAGCCCCAAGCATTATTAGACGTAAGGAGAGTGGCAGTGCAATCAGCTCCAGCTATACCTCCAACACCATTGAAGGTAACAGAAAAGCCTTCTCGTGGAAAGAATAAGTTCTCTTTAAGTAGATTGTTTGGAAAATGATTAAGTACTTTATAGTTTGTGTGAAGATATTGTTGTAAAGTTGTTCAATATACAATTAAACAAGTAAATAGAAAGCATATATTTTGTTACACAAATGTAACATTTTTATGATGAATCATGGGGCTATGCTTGGTTATGAAGGACAATATTTTGTATAAAAATTATTGTAAGGATACTTA

Network for GWHGAAEX012050

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.770
SRP064423	SRR2545915	Juvenile tuber	3.430
SRP108465	SRR5643513	five period of Gastrodia elata	12.680
	SRR5643514	five period of Gastrodia elata	16.220
	SRR5643515	five period of Gastrodia elata	7.050
	SRR5643524	five period of Gastrodia elata	12.450
	SRR5643525	five period of Gastrodia elata	0.160
	SRR5643528	five period of Gastrodia elata	0.050
	SRR5643658	five period of Gastrodia elata	0.120
	SRR5643659	five period of Gastrodia elata	1.420
	SRR5643660	five period of Gastrodia elata	1.110
	SRR5643661	five period of Gastrodia elata	1.630
	SRR5643662	five period of Gastrodia elata	1.790
	SRR5643663	five period of Gastrodia elata	0.850
	SRR5643664	five period of Gastrodia elata	1.120
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.200
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.490
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.790
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.290
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.120
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.090
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.960
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.800
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	20.790
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	20.790
SRP279888	Gastro	Gastrodia elata tuber	0.71
	Juven	Juvenile tuber	2.39
	Mother_Gastro	Mother tuber of Gastrodia elata	3.47
	Mother_Juven	Mother tuber of Juvenile	2.04