Gene detail

Detail information of GWHGAAEX012064/evm.TU.scaffold_4.457

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743806833\|ref\|XP_010927836.1\|	0	PREDICTED: uncharacterized protein LOC105049787 [Elaeis guineensis]
trEMBL	tr\|I1I0E4\|I1I0E4_BRADI	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI3G13450.1}
TAIR	AT1G10280	5.00E-156	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	12893381	12896068	+

Transcript Sequence
>GWHTAAEX012064 GTTTTAATTTTTTTTTCTAACAGTCGAATTAGTTCTATGATTCATTGCATTGCTATGACGAAGCAATGATTCCAAAGCATTCAACAATTTCGAGAAAAATATTATCGCTAATGAAATTCGCGACTGAATTTCGCTTTGGCACATTTATTTTATATTTCTTACAGATCTTGTTAAAATAAAAATTTCAAGCGACGAACATGTCAAGAGAAGAATAATTTTTTTAAGCACGCGCTTTCTTCGCCTTTTCACTTTTATAAATTTATCTTCAATTTCAGTCAACCTCTTCTTCTGATAAGCCAAGCAAATCTCTGCACTGAGATCGCATGAGGAATTTTCAGAGGTTAGGGTTTACACTTTCCTTTATTTCATCTGCTACTGTAAAGTTGTCCATAAGTTTTTGGTGTTTGCGAGTTCGCTGAGCTTTGTACCTGTCTAGATTTCAGTTTTTGTTTGCGATTGTAGGTTTAAGCTTTCCACTCGATTTTTAAAACGAGAATTTAGTGTTTTTTTATGCACTTTTTGCTTTGAGCGTTTGGGTTCGTGAGGGGATTCTGAAGGATCTCTAGATTTTGATCCTGGGCTGTTATTTGATTGCTTTACTGAAGTTTGGGGTGAGTGATGGTCGTAATCAGAATGGAGACACACCCGATTCCGAAGAGCCGAGCTGTTGAGAAACTTGCCGATTTCTGTCCTTCGAGCCCTAAGAAGGATTTGACGCACGGATTCATGAAGCTGGCCTGCGGATTGGCTCTTTTTATGGCTGGAACAGTTCTAGGTATTGCGATGATCCCCCGATTCAACTGGTACTTCACCTCCCACACGGAACTCTTCTTTCCTGAGAGGATGTACTGCTCCAATTGCGATCGGCAAACTATGGTCTTCAAACATTTTGTTAAGCCAAGCTATTTAATGCATATGATGACGGATGATGAACTCTTCTGGAGGGCAACTATGGTCCCCAAGATTCAAGAGTATCCCTTCAAGAGGGTTCCCAAGGTGGCCTTCATGTTCTTGACAAGGGGACCTCTGCCTTTTTCTTCCTTGTGGGATGTATTCTTCAAAGGACATGAAGGGTTGTTTTCTGTTTACGTGCATTCTCTTCCGGACTACAAGCTCAACGTTTCCAAAAAATCAGCCTTCTATGGACGGAAAATCCCCAGTGAGGAGGTTCGATGGGGTTCAGTGAGCCTGGTAGATGCCGAAAAGCGCCTCCTCGCAAATGCGCTTCTGGATTTCTCGAACGAACGCTTCGTGCTGCTTTCTGAGAGTTGTGTTCCAATCTTTAACTTCCCCACAATTTACGATTATCTGATCAATTCCGTACACAGTTTCGTTCAATCCTACGACGAGGACTCGTCTCGCGGCCGCGGCCGTTACAACAAGAGAATGCGTCCTGAGATTATGCTCAGCCAGTGGAGGAAGGGATCGGAGTGGTTTGAGCTTGACCGCAAGCTGGCCGTCGATATTGTCGCAGATTTTAAGTATTACCGGATCTTTCAAAAGCATTGCAGGCCTTCTTGCTTCCCGGATGAGCACTACATTCAAACTTACTTGAACATGTTCCACGGGTCTCTTAATGCGAACCGGAGTGTGACATGGGTTGATTGGTCTAGGCTAGGGCCTCATCCAGCAACATTTGGACGGGAGAGCGTCAACGAGAGTTTTGTCCTGTCCATCAGGAACAATGGAACCATCTGCACATACAACAATGAGCCGACATCTGTCTGTTTTCTCTTTGCAAGGAAGTTTGCTCCCAGCGCATTGGAGGCTCTGCTTAACATGACTTCAACGGTCATGAATTTTTGAATTCTATAGAACAGTCTTGTTCTTCTTAGATCTGACATTCATACAGAATTTCTATTAAAGCTAGAATTTTTCAGATCCGTTCGATGAATGATAGAGACGAATGACATGGAATTATGGAGAGTGCTGTCCCGACGGCTTTTGGGTTGTTTAAGTGGGGTTTTGGGCCGGCAAAGCTTTTTTGTTTTCCGAGAAGATCAGAAATACAATGCTTTTGTTGTAGAAGAAACGTATCAGCTTTTGGGCTACCGCATGTAGCCTTTTTATCATATATAAATTAGGGTTTTGATCTACATTTTGGTAATTATTTCTGATTGAATATTGTTTAGAGTGTAGTTTAATGTGAATATAAGACGTTCATTTGTTGATTAAGTCATTTTATCTGTGCTGTTAATAATGCTGAGAGTTGTTGAGAACAAGATGCAGCGAAGTAATAGAGTTTTTTCTTGCTCCAATCTAAGGATCTCCA

Network for GWHGAAEX012064

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02485.20	Branch	127	353	5.80E-79

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GTnc

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008375	Molecular Function	acetylglucosaminyltransferase activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	34.570
SRP064423	SRR2545915	Juvenile tuber	27.070
SRP108465	SRR5643513	five period of Gastrodia elata	24.490
	SRR5643514	five period of Gastrodia elata	18.780
	SRR5643515	five period of Gastrodia elata	40.010
	SRR5643524	five period of Gastrodia elata	16.640
	SRR5643525	five period of Gastrodia elata	57.270
	SRR5643528	five period of Gastrodia elata	39.160
	SRR5643658	five period of Gastrodia elata	30.510
	SRR5643659	five period of Gastrodia elata	33.550
	SRR5643660	five period of Gastrodia elata	20.200
	SRR5643661	five period of Gastrodia elata	27.630
	SRR5643662	five period of Gastrodia elata	36.470
	SRR5643663	five period of Gastrodia elata	28.230
	SRR5643664	five period of Gastrodia elata	54.060
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	49.360
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	32.830
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	36.210
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	38.490
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	36.110
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	41.490
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	62.030
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	43.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	34.870
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	63.740
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	35.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	35.200
SRP279888	Gastro	Gastrodia elata tuber	25.68
	Juven	Juvenile tuber	11.79
	Mother_Gastro	Mother tuber of Gastrodia elata	87.34
	Mother_Juven	Mother tuber of Juvenile	42.34