Detail information of GWHGAAEX012067/evm.TU.scaffold_4.462


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16323.00E-117Uncharacterized PHD Zn-finger protein
nrgi|695066052|ref|XP_009379903.1|2.40E-147PREDICTED: PHD finger protein ALFIN-LIKE 8-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q60DW3|ALFL5_ORYSJ1.00E-122PHD finger protein ALFIN-LIKE 5
trEMBLtr|M0RIQ5|M0RIQ5_MUSAM9.00E-148Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P16300_001}
TAIRAT3G427903.00E-117alfin-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000111316435713187010-
Transcript Sequence

Network for GWHGAAEX012067

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12165.7Alfin121396.30E-67
PF00628.28PHD2062548.20E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAlfin-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042393Molecular Functionhistone binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.830
SRR2545915Juvenile tuber14.470
SRP108465SRR5643513five period of Gastrodia elata17.680
SRR5643514five period of Gastrodia elata21.480
SRR5643515five period of Gastrodia elata16.310
SRR5643524five period of Gastrodia elata18.760
SRR5643525five period of Gastrodia elata29.770
SRR5643528five period of Gastrodia elata21.070
SRR5643658five period of Gastrodia elata30.760
SRR5643659five period of Gastrodia elata19.420
SRR5643660five period of Gastrodia elata21.480
SRR5643661five period of Gastrodia elata20.200
SRR5643662five period of Gastrodia elata17.060
SRR5643663five period of Gastrodia elata18.950
SRR5643664five period of Gastrodia elata21.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.280
SRR6049655Rhizomagastrodiae_C368-T10_good_124.860
SRR6049656Rhizomagastrodiae_C368-T07_good_122.020
SRR6049657Rhizomagastrodiae_C368-T07_good_124.110
SRR6049658Rhizomagastrodiae_C368-T04_good_122.820
SRR6049659Rhizomagastrodiae_C368-T04_good_121.610
SRR6049660Rhizomagastrodiae_C368-T01_good_125.200
SRR6049661Rhizomagastrodiae_C368-T04_good_121.460
SRR6049662Rhizomagastrodiae_C368-T01_good_121.360
SRR6049663Rhizomagastrodiae_C368-T01_good_124.700
SRR6049664Rhizomagastrodiae_C368-T10_good_124.200
SRR6049665Rhizomagastrodiae_C368-T10_good_124.200
SRP279888GastroGastrodia elata tuber 25.03
JuvenJuvenile tuber23.17
Mother_GastroMother tuber of Gastrodia elata 15.13
Mother_JuvenMother tuber of Juvenile 15.91