Detail information of GWHGAAEX012071/evm.TU.scaffold_40.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|470170612|ref|YP_007551498.1| | 3.00E-12 | aldose 1-epimerase [Azoarcus sp. KH32C] |
| KOG | KOG1594 | 3.00E-36 | Uncharacterized enzymes related to aldose 1-epimerase |
| nr | gi|720024434|ref|XP_010263630.1| | 7.15E-48 | PREDICTED: putative glucose-6-phosphate 1-epimerase isoform X2 [Nelumbo nucifera] |
| Swissprot | tr|Q40784|AAPC_CENCI | 5.00E-14 | Putative glucose-6-phosphate 1-epimerase |
| trEMBL | tr|M0TKP4|M0TKP4_MUSAM | 4.00E-43 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P25580_001} |
| TAIR | AT5G66530 | 3.00E-36 | Galactose mutarotase-like superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000038 | 33447 | 34229 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012071
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01263.19 | Aldose_epim | 55 | 119 | 2.10E-09 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0030246 | Molecular Function | carbohydrate binding |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0016853 | Molecular Function | isomerase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 48.320 |
| SRR2545915 | Juvenile tuber | 59.040 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 16.280 |
| SRR5643514 | five period of Gastrodia elata | 16.630 | |
| SRR5643515 | five period of Gastrodia elata | 10.690 | |
| SRR5643524 | five period of Gastrodia elata | 13.860 | |
| SRR5643525 | five period of Gastrodia elata | 9.920 | |
| SRR5643528 | five period of Gastrodia elata | 9.030 | |
| SRR5643658 | five period of Gastrodia elata | 32.310 | |
| SRR5643659 | five period of Gastrodia elata | 45.490 | |
| SRR5643660 | five period of Gastrodia elata | 45.850 | |
| SRR5643661 | five period of Gastrodia elata | 50.290 | |
| SRR5643662 | five period of Gastrodia elata | 71.620 | |
| SRR5643663 | five period of Gastrodia elata | 65.240 | |
| SRR5643664 | five period of Gastrodia elata | 74.580 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 59.800 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 96.900 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 48.880 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 71.600 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 83.650 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 84.250 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 78.160 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 77.900 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 52.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 52.300 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 81.470 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 81.470 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 99.41 |
| Juven | Juvenile tuber | 49.13 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 44.81 | |
| Mother_Juven | Mother tuber of Juvenile | 62.00 |