Detail information of GWHGAAEX012097/evm.TU.scaffold_40.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|256832660|ref|YP_003161387.1|1.00E-29serine/threonine protein kinase with PASTA sensor(s) [Jonesia denitrificans DSM 20603]
KOGKOG05760Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family
nrgi|672125213|ref|XP_008786021.1|0PREDICTED: serine/threonine-protein kinase svkA [Phoenix dactylifera]
Swissprottr|O22040|ANP1_ARATH7.00E-46Mitogen-activated protein kinase kinase kinase ANP1
trEMBLtr|M0TDI8|M0TDI8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P00480_001}
TAIRAT1G692200Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003827011592757470+
Transcript Sequence

Network for GWHGAAEX012097

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase2124662.00E-68
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE20-Pl

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.400
SRR2545915Juvenile tuber29.340
SRP108465SRR5643513five period of Gastrodia elata18.540
SRR5643514five period of Gastrodia elata15.820
SRR5643515five period of Gastrodia elata15.660
SRR5643524five period of Gastrodia elata17.060
SRR5643525five period of Gastrodia elata27.420
SRR5643528five period of Gastrodia elata26.620
SRR5643658five period of Gastrodia elata28.630
SRR5643659five period of Gastrodia elata23.730
SRR5643660five period of Gastrodia elata21.360
SRR5643661five period of Gastrodia elata22.580
SRR5643662five period of Gastrodia elata24.750
SRR5643663five period of Gastrodia elata24.790
SRR5643664five period of Gastrodia elata27.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.260
SRR6049655Rhizomagastrodiae_C368-T10_good_119.180
SRR6049656Rhizomagastrodiae_C368-T07_good_120.420
SRR6049657Rhizomagastrodiae_C368-T07_good_123.510
SRR6049658Rhizomagastrodiae_C368-T04_good_124.200
SRR6049659Rhizomagastrodiae_C368-T04_good_129.060
SRR6049660Rhizomagastrodiae_C368-T01_good_122.880
SRR6049661Rhizomagastrodiae_C368-T04_good_122.000
SRR6049662Rhizomagastrodiae_C368-T01_good_117.240
SRR6049663Rhizomagastrodiae_C368-T01_good_117.630
SRR6049664Rhizomagastrodiae_C368-T10_good_113.810
SRR6049665Rhizomagastrodiae_C368-T10_good_113.810
SRP279888GastroGastrodia elata tuber 23.95
JuvenJuvenile tuber29.30
Mother_GastroMother tuber of Gastrodia elata 30.29
Mother_JuvenMother tuber of Juvenile 33.36