Detail information of GWHGAAEX012117/evm.TU.scaffold_40.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|338740929|ref|YP_004677891.1|1.00E-22CDP-alcohol phosphatidyltransferase [Hyphomicrobium sp. MC1]
KOGKOG16172.00E-72CDP-alcohol phosphatidyltransferase/Phosphatidylglycerol-phosphate synthase
nrgi|743759107|ref|XP_010930377.1|4.15E-131PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic [Elaeis guineensis]
Swissprottr|Q93YW7|CLS_ARATH9.00E-98Cardiolipin synthase, mitochondrial (Precursor)
trEMBLtr|W9RFF5|W9RFF5_9ROSA4.00E-107Cardiolipin synthase {ECO:0000313|EMBL:EXB88432.1}
TAIRAT4G048702.00E-72cardiolipin synthase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003833837353394155+
Transcript Sequence

Network for GWHGAAEX012117

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01066.20CDP-OH_P_transf1492137.20E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08744CRLS Metabolic pathways map01100
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName
GO:0008654Biological Processphospholipid biosynthetic process
GO:0016780Molecular Functionphosphotransferase activity, for other substituted phosphate groups
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.560
SRR2545915Juvenile tuber13.510
SRP108465SRR5643513five period of Gastrodia elata15.610
SRR5643514five period of Gastrodia elata18.740
SRR5643515five period of Gastrodia elata17.790
SRR5643524five period of Gastrodia elata17.700
SRR5643525five period of Gastrodia elata12.590
SRR5643528five period of Gastrodia elata13.450
SRR5643658five period of Gastrodia elata11.970
SRR5643659five period of Gastrodia elata22.610
SRR5643660five period of Gastrodia elata21.430
SRR5643661five period of Gastrodia elata21.870
SRR5643662five period of Gastrodia elata21.910
SRR5643663five period of Gastrodia elata23.600
SRR5643664five period of Gastrodia elata19.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.730
SRR6049655Rhizomagastrodiae_C368-T10_good_126.330
SRR6049656Rhizomagastrodiae_C368-T07_good_117.530
SRR6049657Rhizomagastrodiae_C368-T07_good_115.020
SRR6049658Rhizomagastrodiae_C368-T04_good_117.750
SRR6049659Rhizomagastrodiae_C368-T04_good_118.970
SRR6049660Rhizomagastrodiae_C368-T01_good_117.690
SRR6049661Rhizomagastrodiae_C368-T04_good_113.430
SRR6049662Rhizomagastrodiae_C368-T01_good_118.670
SRR6049663Rhizomagastrodiae_C368-T01_good_121.070
SRR6049664Rhizomagastrodiae_C368-T10_good_122.070
SRR6049665Rhizomagastrodiae_C368-T10_good_122.070
SRP279888GastroGastrodia elata tuber 23.65
JuvenJuvenile tuber25.25
Mother_GastroMother tuber of Gastrodia elata 17.34
Mother_JuvenMother tuber of Juvenile 17.48