Detail information of GWHGAAEX012129/evm.TU.scaffold_40.92


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|113475887|ref|YP_721948.1|1.00E-103asparaginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
KOGKOG05542.00E-167Asparaginyl-tRNA synthetase (mitochondrial)
nrgi|672162334|ref|XP_008800991.1|0PREDICTED: asparagine--tRNA ligase, cytoplasmic 2-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9SW95|SYNC2_ARATH6.00E-168Asparagine--tRNA ligase, cytoplasmic 2
trEMBLtr|V4TFR2|V4TFR2_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR50460.1}
TAIRAT3G074202.00E-167asparaginyl-tRNA synthetase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003841562164171972-
Transcript Sequence

Network for GWHGAAEX012129

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00152.19tRNA-synt_22022623.40E-08
PF00152.19tRNA-synt_23466101.20E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01893NARS, asnS Aminoacyl-tRNA biosynthesis map00970

Gene Ontology

GO term OntologyName
GO:0006418Biological ProcesstRNA aminoacylation for protein translation
GO:0006421Biological Processasparaginyl-tRNA aminoacylation
GO:0000166Molecular Functionnucleotide binding
GO:0004816Molecular Functionasparagine-tRNA ligase activity
GO:0005524Molecular FunctionATP binding
GO:0004812Molecular Functionaminoacyl-tRNA ligase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.770
SRR2545915Juvenile tuber13.240
SRP108465SRR5643513five period of Gastrodia elata13.150
SRR5643514five period of Gastrodia elata13.420
SRR5643515five period of Gastrodia elata11.900
SRR5643524five period of Gastrodia elata13.080
SRR5643525five period of Gastrodia elata14.960
SRR5643528five period of Gastrodia elata14.590
SRR5643658five period of Gastrodia elata16.670
SRR5643659five period of Gastrodia elata15.240
SRR5643660five period of Gastrodia elata16.480
SRR5643661five period of Gastrodia elata13.900
SRR5643662five period of Gastrodia elata14.200
SRR5643663five period of Gastrodia elata13.610
SRR5643664five period of Gastrodia elata12.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.120
SRR6049655Rhizomagastrodiae_C368-T10_good_110.830
SRR6049656Rhizomagastrodiae_C368-T07_good_19.430
SRR6049657Rhizomagastrodiae_C368-T07_good_111.690
SRR6049658Rhizomagastrodiae_C368-T04_good_19.250
SRR6049659Rhizomagastrodiae_C368-T04_good_110.380
SRR6049660Rhizomagastrodiae_C368-T01_good_19.950
SRR6049661Rhizomagastrodiae_C368-T04_good_18.500
SRR6049662Rhizomagastrodiae_C368-T01_good_19.680
SRR6049663Rhizomagastrodiae_C368-T01_good_18.870
SRR6049664Rhizomagastrodiae_C368-T10_good_110.550
SRR6049665Rhizomagastrodiae_C368-T10_good_110.550
SRP279888GastroGastrodia elata tuber 19.78
JuvenJuvenile tuber26.85
Mother_GastroMother tuber of Gastrodia elata 14.22
Mother_JuvenMother tuber of Juvenile 22.24