Detail information of GWHGAAEX012133/evm.TU.scaffold_40.98


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428314938|ref|YP_007118956.1|5.00E-70Pirin domain-containing protein [Oscillatoria nigro-viridis PCC 7112]
nrgi|514812540|ref|XP_004981064.1|1.63E-142PREDICTED: pirin-like protein-like isoform X2 [Setaria italica]
Swissprottr|Q9SEE4|PIRL_SOLLC7.00E-132Pirin-like protein
trEMBLtr|K4ABY7|K4ABY7_SETIT2.00E-143Uncharacterized protein {ECO:0000313|EnsemblPlants:Si036394m}
TAIRAT1G505901.00E-114RmlC-like cupins superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003843911554393455-
Transcript Sequence

Network for GWHGAAEX012133

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02678.15Pirin821761.80E-28
PF05726.12Pirin_C2293331.80E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms285.830
SRR2545915Juvenile tuber223.000
SRP108465SRR5643513five period of Gastrodia elata33.320
SRR5643514five period of Gastrodia elata21.110
SRR5643515five period of Gastrodia elata199.380
SRR5643524five period of Gastrodia elata120.710
SRR5643525five period of Gastrodia elata259.210
SRR5643528five period of Gastrodia elata1121.810
SRR5643658five period of Gastrodia elata136.310
SRR5643659five period of Gastrodia elata31.760
SRR5643660five period of Gastrodia elata13.760
SRR5643661five period of Gastrodia elata27.930
SRR5643662five period of Gastrodia elata87.970
SRR5643663five period of Gastrodia elata32.590
SRR5643664five period of Gastrodia elata112.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.610
SRR6049655Rhizomagastrodiae_C368-T10_good_120.120
SRR6049656Rhizomagastrodiae_C368-T07_good_114.500
SRR6049657Rhizomagastrodiae_C368-T07_good_116.540
SRR6049658Rhizomagastrodiae_C368-T04_good_118.750
SRR6049659Rhizomagastrodiae_C368-T04_good_118.360
SRR6049660Rhizomagastrodiae_C368-T01_good_134.960
SRR6049661Rhizomagastrodiae_C368-T04_good_129.840
SRR6049662Rhizomagastrodiae_C368-T01_good_124.130
SRR6049663Rhizomagastrodiae_C368-T01_good_135.320
SRR6049664Rhizomagastrodiae_C368-T10_good_130.210
SRR6049665Rhizomagastrodiae_C368-T10_good_130.210
SRP279888GastroGastrodia elata tuber 67.07
JuvenJuvenile tuber22.35
Mother_GastroMother tuber of Gastrodia elata 2,408.06
Mother_JuvenMother tuber of Juvenile 6,666.95